TCM_025674 (Theobroma cacao)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TCM_025674 T256465_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY10302 MADS box 10 56

Links

Other MADS box family TFs
Other Theobroma cacao TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28677.m000055 Ricinus communis 28677.m000055 N 0.000
29692.m000540 Ricinus communis 29692.m000540 N 0.000
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.000
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.000
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.000
GAI Arabidopsis thaliana AT1G14920 N 0.000
RGA Arabidopsis thaliana AT2G01570 N 0.000
SLR1 Oryza indica BGIOSGA013420 N 0.000
Bo7g078550 Brassica oleracea Bo7g078550 N 0.000
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.000
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.000
Bra024875 Brassica rapa Bra024875 N 0.000
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.000
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.000
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.000
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.000
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.000
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.000
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.000
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.000
Ca_05046 Cicer arietinum Ca_05046 N 0.000
Ca_13295 Cicer arietinum Ca_13295 I 0.000
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.000
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.000
Cla003996 Citrullus lanatus Cla003996 N 0.000
Cla020062 Citrullus lanatus Cla020062 N 0.000
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.000
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.000
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.000
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.000
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.000
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.000
F775_03572 Aegilops tauschii F775_03572 N 0.000
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.000
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.000
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.000
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.000
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.000
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.000
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.000
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.000
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.000
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.000
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.000
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.000
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.000
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.000
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.000
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.000
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.000
MDP0000237978 Malus domestica MDP0000237978 N 0.000
MDP0000669451 Malus domestica MDP0000669451 I 0.000
mgf008289m Mimulus guttatus mgf008289m N 0.000
mgf025772m Mimulus guttatus mgf025772m N 0.000
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.000
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.000
OB03G38380 Oryza brachyantha OB03G38380 N 0.000
OBART03G31370 Oryza barthii OBART03G31370 N 0.000
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.000
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.000
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.000
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.000
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.000
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.000
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.000
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.000
SLR1 Oryza sativa OS03G0707600 N 0.000
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.000
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.000
PK14700.1 Cannabis sativa PK14700.1 N 0.000
Pm006304 Prunus mume Pm006304 N 0.000
Pm014329 Prunus mume Pm014329 I 0.000
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.000
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.000
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.000
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.000
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.000
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.000
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.000
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.000
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.000
Si039400m.g Setaria italica Si039400m.g N 0.000
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.000
TCM_010965 Theobroma cacao TCM_010965 N 0.000
TCM_019165 Theobroma cacao TCM_019165 N 0.000
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.000
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.000
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.000
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.000
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.000