CRE27053 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE27053 T302290_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.861 0.671
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.852 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE27053 Nuclear receptor 53 126

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.756
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.833
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.794
ASU_02755 Ascaris suum ASU_02755 I 0.878
ASU_02757 Ascaris suum ASU_02757 N 0.892
ASU_03657 Ascaris suum ASU_03657 I 0.811
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.794
CBG10855 Caenorhabditis briggsae CBG10855 I 0.849
CBG10857 Caenorhabditis briggsae CBG10857 I 0.856
CBG23380 Caenorhabditis briggsae CBG23380 D 0.852
CBG23381 Caenorhabditis briggsae CBG23381 I 0.884
CBN24827 Caenorhabditis brenneri CBN24827 I 0.851
CBN28497 Caenorhabditis brenneri CBN28497 I 0.852
CBN28791 Caenorhabditis brenneri CBN28791 I 0.887
CBN29725 Caenorhabditis brenneri CBN29725 I 0.994
CJA00680 Caenorhabditis japonica CJA00680 I 0.869
CJA03696 Caenorhabditis japonica CJA03696 I 0.817
CJA08896 Caenorhabditis japonica CJA08896 I 0.849
CRE00146 Caenorhabditis remanei CRE00146 N 0.827
CRE00149 Caenorhabditis remanei CRE00149 I 0.835
CRE00606 Caenorhabditis remanei CRE00606 I 0.856
CRE27050 Caenorhabditis remanei CRE27050 I 0.852
CRE27052 Caenorhabditis remanei CRE27052 I 0.883
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.791
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.826
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.806
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.756
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.824
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.872
L889_g1557 Steinernema feltiae L889_g1557 I 0.842
L889_g1891 Steinernema feltiae L889_g1891 I 0.831
L892_g17612 Steinernema scapterisci L892_g17612 I 0.810
L892_g4169 Steinernema scapterisci L892_g4169 I 0.844
L893_g28857 Steinernema glaseri L893_g28857 I 0.856
L893_g3565 Steinernema glaseri L893_g3565 I 0.809
L898_g9866 Steinernema monticolum L898_g9866 I 0.842
LOAG_16377 Loa loa LOAG_16377 I 0.794
NECAME_01944 Necator americanus NECAME_01944 I 0.755
NECAME_08394 Necator americanus NECAME_08394 I 0.854
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.811
PPA06637 Pristionchus pacificus PPA06637 I 0.781
PPA21777 Pristionchus pacificus PPA21777 I 0.846
PPA24468 Pristionchus pacificus PPA24468 I 0.806
PPA24481 Pristionchus pacificus PPA24481 I 0.868
PPA29548 Pristionchus pacificus PPA29548 N 0.781
PPA29597 Pristionchus pacificus PPA29597 I 0.878
PTRK_0000038300 Parastrongyloides trichosuri PTRK_0000038300 N 0.777
PTRK_0000843500 Parastrongyloides trichosuri PTRK_0000843500 N 0.846
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.746
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.806
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.877
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.828
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.868
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.838
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.767
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.746
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.776
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.844
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.849
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.975
nhr-137 Caenorhabditis elegans WBGene00003727 N 0.853
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.890
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.861
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.856
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.771