GD17495 (Drosophila simulans)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0189047 T319555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.746 0.746
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.746 0.746
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.746 0.746
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.746 0.746
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.731 0.731
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.723 0.723
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.723 0.723
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.723 0.723
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.723 0.723
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.723 0.723
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.723 0.723
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.723 0.723
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.723 0.723
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.723 0.723
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.723 0.723
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.723 0.723
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.723 0.723
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.708 0.708
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.708 0.708
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.708 0.708
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.708 0.708
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.708 0.708
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.708 0.708
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.708 0.708
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.708 0.708
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.708 0.708
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.708 0.708
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.708 0.708
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.708 0.708
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.708 0.708
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.708 0.708
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.708 0.708
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.708 0.708
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.708 0.708
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.708 0.708
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.708 0.708
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.708 0.708
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.708 0.708
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.708 0.708
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.708 0.708
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0215897 Runt 110 239

Links

Other Runt family TFs
Other Drosophila simulans TFs

353 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I
CBG01233 Caenorhabditis briggsae CBG01233 N
CBG01235 Caenorhabditis briggsae CBG01235 I
CBG01243 Caenorhabditis briggsae CBG01243 I
CBG01250 Caenorhabditis briggsae CBG01250 D
CBG01251 Caenorhabditis briggsae CBG01251 I
CBG01352 Caenorhabditis briggsae CBG01352 I
CBG01353 Caenorhabditis briggsae CBG01353 I
CBG06599 Caenorhabditis briggsae CBG06599 I
CBG06609 Caenorhabditis briggsae CBG06609 I
CBG09567 Caenorhabditis briggsae CBG09567 I
CBG15881 Caenorhabditis briggsae CBG15881 I
CBG17898 Caenorhabditis briggsae CBG17898 I
CBG17906 Caenorhabditis briggsae CBG17906 I
CBG19141 Caenorhabditis briggsae CBG19141 I
CBG19144 Caenorhabditis briggsae CBG19144 I
CBG27350 Caenorhabditis briggsae CBG27350 I
CBN00299 Caenorhabditis brenneri CBN00299 I
CBN03087 Caenorhabditis brenneri CBN03087 I
CBN15241 Caenorhabditis brenneri CBN15241 I
CBN18082 Caenorhabditis brenneri CBN18082 I
CJA03572 Caenorhabditis japonica CJA03572 I
CJA19466 Caenorhabditis japonica CJA19466 I
CRE01447 Caenorhabditis remanei CRE01447 N
CRE05044 Caenorhabditis remanei CRE05044 I
CRE05778 Caenorhabditis remanei CRE05778 I
CRE08749 Caenorhabditis remanei CRE08749 I
CRE08750 Caenorhabditis remanei CRE08750 N
CRE08751 Caenorhabditis remanei CRE08751 I
CRE08753 Caenorhabditis remanei CRE08753 I
CRE08754 Caenorhabditis remanei CRE08754 I
CRE08755 Caenorhabditis remanei CRE08755 I
CRE08760 Caenorhabditis remanei CRE08760 I
CRE08762 Caenorhabditis remanei CRE08762 I
CRE11350 Caenorhabditis remanei CRE11350 N
CRE14845 Caenorhabditis remanei CRE14845 I
CRE14847 Caenorhabditis remanei CRE14847 I
CRE14848 Caenorhabditis remanei CRE14848 I
CRE18698 Caenorhabditis remanei CRE18698 I
CRE18699 Caenorhabditis remanei CRE18699 I
CRE30948 Caenorhabditis remanei CRE30948 I
HCOI00483700 Haemonchus contortus HCOI00483700 I
HCOI01190000 Haemonchus contortus HCOI01190000 I
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I
L596_g14586 Steinernema carpocapsae L596_g14586 I
L596_g14588 Steinernema carpocapsae L596_g14588 I
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I
nhr-44 Caenorhabditis elegans WBGene00003634 I
WBGene00003673 Caenorhabditis elegans WBGene00003673 I
nhr-99 Caenorhabditis elegans WBGene00003689 I
nhr-117 Caenorhabditis elegans WBGene00003707 I
nhr-123 Caenorhabditis elegans WBGene00003713 I
nhr-125 Caenorhabditis elegans WBGene00003715 I
nhr-130 Caenorhabditis elegans WBGene00003720 I
nhr-133 Caenorhabditis elegans WBGene00003723 I
nhr-232 Caenorhabditis elegans WBGene00012494 D
nhr-179 Caenorhabditis elegans WBGene00017512 I
nhr-182 Caenorhabditis elegans WBGene00018265 D
nhr-183 Caenorhabditis elegans WBGene00018266 I
nhr-184 Caenorhabditis elegans WBGene00018415 I
nhr-190 Caenorhabditis elegans WBGene00018622 I
nhr-201 Caenorhabditis elegans WBGene00019741 I
nhr-202 Caenorhabditis elegans WBGene00019742 I
nhr-212 Caenorhabditis elegans WBGene00020153 I