CBG11867 (Caenorhabditis briggsae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CBG11867 T326860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBG11867 Sox 1574 1655

Links

Other Sox family TFs
Other Caenorhabditis briggsae TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29813.m001508 Ricinus communis 29813.m001508 I
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I
AGL30 Arabidopsis thaliana AT2G03060 I
Bo6g109050 Brassica oleracea Bo6g109050 I
Bo8g068060 Brassica oleracea Bo8g068060 I
Bo8g104060 Brassica oleracea Bo8g104060 I
Bo9g072860 Brassica oleracea Bo9g072860 N
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I
Bra004393 Brassica rapa Bra004393 I
Bra016544 Brassica rapa Bra016544 I
Bra017404 Brassica rapa Bra017404 I
Bra024792 Brassica rapa Bra024792 I
Bra025685 Brassica rapa Bra025685 I
Bra031049 Brassica rapa Bra031049 I
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I
Carubv10009419m.g Capsella rubella Carubv10009419m.g I
Carubv10017440m.g Capsella rubella Carubv10017440m.g I
Carubv10020210m.g Capsella rubella Carubv10020210m.g I
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I
cassava17346.m1 Manihot esculenta cassava17346.m1 I
Ca_16376 Cicer arietinum Ca_16376 I
Ca_18082 Cicer arietinum Ca_18082 I
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I
Cla010361 Citrullus lanatus Cla010361 I
Cucsa.284960 Cucumis sativus Cucsa.284960 I
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N
F775_13266 Aegilops tauschii F775_13266 I
GLYMA07G35610 Glycine max GLYMA07G35610 N
GLYMA20G04500 Glycine max GLYMA20G04500 N
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I
Lus10026613.g Linum usitatissimum Lus10026613.g I
Lus10030450.g Linum usitatissimum Lus10030450.g I
Lus10036761.g Linum usitatissimum Lus10036761.g N
Lus10037166.g Linum usitatissimum Lus10037166.g N
MDP0000146231 Malus domestica MDP0000146231 I
MDP0000146415 Malus domestica MDP0000146415 I
MDP0000147667 Malus domestica MDP0000147667 I
MDP0000193129 Malus domestica MDP0000193129 I
MDP0000773068 Malus domestica MDP0000773068 I
MDP0000919323 Malus domestica MDP0000919323 I
MLOC_11474 Hordeum vulgare MLOC_11474 I
MTR_4g108720 Medicago truncatula MTR_4g108720 I
MTR_5g041650 Medicago truncatula MTR_5g041650 I
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I
Pavir.J04162 Panicum virgatum Pavir.J04162 I
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I
PK03147.1 Cannabis sativa PK03147.1 I
Pm006479 Prunus mume Pm006479 I
Pm024895 Prunus mume Pm024895 I
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I
Sb05g025970 Sorghum bicolor Sb05g025970 I
TCM_011687 Theobroma cacao TCM_011687 I
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I
TRIUR3_33223 Triticum urartu TRIUR3_33223 I