CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm018989
(
Prunus mume
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pm018989
T006610_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.761
0.939
Q1ESI9_MAIZE
M09714_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.735
0.837
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.690
0.816
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.682
0.796
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm018989
AP2
79
130
CNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTALDAALAYDEAAKAMYGP
Links
Other
AP2
family TFs
Other
Prunus mume
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB2G
Arabidopsis thaliana
AT5G18450
D
0.682
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.735
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.690
PK07402.1
Cannabis sativa
PK07402.1
D
0.761
AMTR_s00023p00044590
Amborella trichopoda
AMTR_s00023p00044590
I
0.708
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.706
BGIOSGA026461
Oryza indica
BGIOSGA026461
I
0.714
BGIOSGA026464
Oryza indica
BGIOSGA026464
I
0.714
Bo4g190040
Brassica oleracea
Bo4g190040
I
0.716
Bo9g155940
Brassica oleracea
Bo9g155940
I
0.682
Bo9g177130
Brassica oleracea
Bo9g177130
I
0.707
Bra002159
Brassica rapa
Bra002159
I
0.682
Bra017011
Brassica rapa
Bra017011
I
0.716
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.693
BRADI3G12680
Brachypodium distachyon
BRADI3G12680
I
0.728
F775_01779
Aegilops tauschii
F775_01779
I
0.701
F775_02345
Aegilops tauschii
F775_02345
I
0.716
F775_05774
Aegilops tauschii
F775_05774
I
0.690
F775_32062
Aegilops tauschii
F775_32062
I
0.743
GLYMA02G42960
Glycine max
GLYMA02G42960
I
0.677
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.732
GLYMA12G11150
Glycine max
GLYMA12G11150
I
0.724
GLYMA12G32400
Glycine max
GLYMA12G32400
I
0.715
GLYMA13G38030
Glycine max
GLYMA13G38030
I
0.715
GLYMA14G06080
Glycine max
GLYMA14G06080
I
0.677
GRMZM2G006745
Zea mays
GRMZM2G006745
I
0.735
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.715
GSMUA_Achr5G28050_001
Musa acuminata
GSMUA_Achr5G28050_001
I
0.699
GSMUA_Achr6G32780_001
Musa acuminata
GSMUA_Achr6G32780_001
I
0.703
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.727
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.738
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.691
LPERR08G12790
Leersia perrieri
LPERR08G12790
I
0.710
LPERR08G20650
Leersia perrieri
LPERR08G20650
I
0.700
MLOC_12223
Hordeum vulgare
MLOC_12223
I
0.713
MLOC_66580
Hordeum vulgare
MLOC_66580
I
0.716
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.690
MTR_5g083330
Medicago truncatula
MTR_5g083330
I
0.694
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.717
MTR_7g070220
Medicago truncatula
MTR_7g070220
I
0.695
OB01G13930
Oryza brachyantha
OB01G13930
I
0.706
OB08G30790
Oryza brachyantha
OB08G30790
I
0.714
OBART01G04210
Oryza barthii
OBART01G04210
I
0.706
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.706
OGLUM08G25470
Oryza glumaepatula
OGLUM08G25470
I
0.714
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.706
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.706
OMERI08G18820
Oryza meridionalis
OMERI08G18820
I
0.714
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.706
ONIVA09G01190
Oryza nivara
ONIVA09G01190
I
0.714
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.706
OPUNC08G21890
Oryza punctata
OPUNC08G21890
I
0.714
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.706
ORGLA08G0193700
Oryza glaberrima
ORGLA08G0193700
I
0.714
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.706
ORUFI08G26490
Oryza rufipogon
ORUFI08G26490
I
0.714
DREB2A
Oryza sativa
OS01G0165000
I
0.706
DREB2C
Oryza sativa
OS08G0565200
I
0.714
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.708
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.728
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.747
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.821
PRUPE_ppa022733mg
Prunus persica
PRUPE_ppa022733mg
I
0.718
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.744
Sb03g004980
Sorghum bicolor
Sb03g004980
I
0.706
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.737
DREB2C
Arabidopsis lyrata
scaffold_402826.1
I
0.683
scaffold_601912.1
Arabidopsis lyrata
scaffold_601912.1
I
0.682
Si002067m.g
Setaria italica
Si002067m.g
I
0.712
Si022619m.g
Setaria italica
Si022619m.g
I
0.730
Si024059m.g
Setaria italica
Si024059m.g
I
0.716
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.708
TCM_026121
Theobroma cacao
TCM_026121
I
0.738
TCM_043275
Theobroma cacao
TCM_043275
I
0.692
TCM_043302
Theobroma cacao
TCM_043302
I
0.694
TCM_043306
Theobroma cacao
TCM_043306
I
0.694
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.743
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.743
Traes_2AL_3FB37A3E7
Triticum aestivum
Traes_2AL_3FB37A3E7
I
0.696
Traes_2BL_B397F2CE3
Triticum aestivum
Traes_2BL_B397F2CE3
I
0.718
Traes_2DL_B32203C91
Triticum aestivum
Traes_2DL_B32203C91
I
0.716
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.690
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.690
Traes_5BL_7F0FD1538
Triticum aestivum
Traes_5BL_7F0FD1538
I
0.677
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.743
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.690
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.736
Ca_12446
Cicer arietinum
Ca_12446
I
0.684
Ca_14133
Cicer arietinum
Ca_14133
I
0.681
Ca_22585
Cicer arietinum
Ca_22585
I
0.701
Cla001755
Citrullus lanatus
Cla001755
I
0.763
Cla006713
Citrullus lanatus
Cla006713
I
0.744
Cla012194
Citrullus lanatus
Cla012194
I
0.700
Cla022803
Citrullus lanatus
Cla022803
I
0.697
Pm003634
Prunus mume
Pm003634
I
0.691
Pm015262
Prunus mume
Pm015262
I
0.718
29729.m002292
Ricinus communis
29729.m002292
I
0.745
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.739
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.763
Cucsa.130200
Cucumis sativus
Cucsa.130200
I
0.685
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.745
Cucsa.231820
Cucumis sativus
Cucsa.231820
I
0.697
mgf007881m
Mimulus guttatus
mgf007881m
I
0.681
mgf017629m
Mimulus guttatus
mgf017629m
I
0.680
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.748
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.776
Bostr.13129s0423
Boechera stricta
Bostr.13129s0423
I
0.684
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.740
Bostr.26527s0367
Boechera stricta
Bostr.26527s0367
I
0.682
Cagra.0712s0008
Capsella grandiflora
Cagra.0712s0008
I
0.677
Carubv10002425m.g
Capsella rubella
Carubv10002425m.g
I
0.677
Ciclev10022244m.g
Citrus clementina
Ciclev10022244m.g
I
0.702
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.714
Eucgr.F01607
Eucalyptus grandis
Eucgr.F01607
I
0.692
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.742
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.712
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.771
evm.TU.supercontig_51.23
Carica papaya
evm.TU.supercontig_51.23
I
0.686
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.716
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.807
Gorai.011G235900
Gossypium raimondii
Gorai.011G235900
I
0.691
Lus10006127.g
Linum usitatissimum
Lus10006127.g
I
0.703
Lus10010632.g
Linum usitatissimum
Lus10010632.g
I
0.707
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.686
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.702
Lus10024298.g
Linum usitatissimum
Lus10024298.g
I
0.703
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.702
MDP0000147009
Malus domestica
MDP0000147009
I
0.813
MDP0000165880
Malus domestica
MDP0000165880
I
0.807
MDP0000290585
Malus domestica
MDP0000290585
I
0.719
MDP0000446783
Malus domestica
MDP0000446783
I
0.813
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.714
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.737
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.737
Pavir.Ea00429
Panicum virgatum
Pavir.Ea00429
I
0.704
Pavir.J22169
Panicum virgatum
Pavir.J22169
I
0.716
Pavir.J25464
Panicum virgatum
Pavir.J25464
I
0.716
Pavir.J37967
Panicum virgatum
Pavir.J37967
I
0.701
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.732
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.743
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.732
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.743
Thhalv10015907m.g
Eutrema salsugineum
Thhalv10015907m.g
I
0.682
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.718
PK07829.1
Cannabis sativa
PK07829.1
I
0.702
chr1.CM0195.510.nd
Lotus japonicus
chr1.CM0195.510.nd
I
0.695
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.758
SELMODRAFT_38498
Selaginella moellendorffii
SELMODRAFT_38498
N
0.697
SELMODRAFT_38500
Selaginella moellendorffii
SELMODRAFT_38500
N
0.697
TRIUR3_03342
Triticum urartu
TRIUR3_03342
N
0.688
PK16401.1
Cannabis sativa
PK16401.1
N
0.709