cassava34699.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava34699.m1 T202090_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava34699.m1 GRAS 148 518

Links

Other GRAS family TFs
Other Manihot esculenta TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.715
SCL5 Arabidopsis thaliana AT1G50600 N 0.759
PAT1 Arabidopsis thaliana AT5G48150 N 0.762
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.707
Bo2g149670 Brassica oleracea Bo2g149670 N 0.740
Bo5g079990 Brassica oleracea Bo5g079990 N 0.707
Bo6g022330 Brassica oleracea Bo6g022330 N 0.759
Bo7g089080 Brassica oleracea Bo7g089080 N 0.738
Bo9g009240 Brassica oleracea Bo9g009240 N 0.760
Bo9g009260 Brassica oleracea Bo9g009260 N 0.737
Bra018860 Brassica rapa Bra018860 N 0.759
Bra020715 Brassica rapa Bra020715 N 0.740
Bra026077 Brassica rapa Bra026077 N 0.764
Bra036185 Brassica rapa Bra036185 N 0.737
Bra037509 Brassica rapa Bra037509 N 0.731
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.715
F775_15940 Aegilops tauschii F775_15940 N 0.702
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.759
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.753
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.799
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.715
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.734
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.808
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.751
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.726
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.705
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.718
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.707
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.737
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.737
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.791
OB07G25870 Oryza brachyantha OB07G25870 N 0.713
OBART07G20130 Oryza barthii OBART07G20130 N 0.705
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.707
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.710
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.709
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.707
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.710
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.707
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.707
CIGR2 Oryza sativa OS07G0583600 N 0.727
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.789
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.762
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.848
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.810
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.805
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.805
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.707
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.748
Si029418m.g Setaria italica Si029418m.g N 0.713
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.794
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.770
TCM_002319 Theobroma cacao TCM_002319 N 0.805
TCM_030733 Theobroma cacao TCM_030733 N 0.824
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.715
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.702
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.710
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.824
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.808
Ca_09696 Cicer arietinum Ca_09696 N 0.720
Ca_09786 Cicer arietinum Ca_09786 N 0.794
Ca_13855 Cicer arietinum Ca_13855 N 0.759
Cla001429 Citrullus lanatus Cla001429 N 0.791
Cla004565 Citrullus lanatus Cla004565 N 0.764
Pm012019 Prunus mume Pm012019 N 0.827
Pm015021 Prunus mume Pm015021 N 0.808
27613.m000642 Ricinus communis 27613.m000642 N 0.881
29949.m000124 Ricinus communis 29949.m000124 N 0.803
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.919
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.821
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.721
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.748
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.778
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.794
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.745
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.762
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.756
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.764
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.753
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.753
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.764
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.780
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.786
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.783
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.775
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.791
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.810
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.805
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.816
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.810
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.791
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.805
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.786
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.809
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.753
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.749
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.810
MDP0000152670 Malus domestica MDP0000152670 N 0.805
MDP0000205236 Malus domestica MDP0000205236 N 0.816
MDP0000284679 Malus domestica MDP0000284679 N 0.816
MDP0000804652 Malus domestica MDP0000804652 N 0.802
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.786
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.715
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.843
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.805
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.730
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.751
PK09018.1 Cannabis sativa PK09018.1 N 0.775
PK15082.1 Cannabis sativa PK15082.1 N 0.772
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.743
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.797
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.767