HDX (Vicugna pacos)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSVPAG00000003255 T217063_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HDX
M01246_2.00 		Homo sapiens
HNNNNNN
NNNNNND		 PBM
Lambert et al.(2019)
pTH11271 		0.867 0.991
Hdx
M00463_2.00 		Mus musculus
HNWYHNN
NNDRWND		 PBM
Berger et al.(2008)
Hdx_3845 		0.867 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000003011 Homeodomain 2 60
ENSVPAP00000003011 Homeodomain 442 501

Links

Other Homeodomain family TFs
Other Vicugna pacos TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB1C Arabidopsis thaliana AT4G25470 D 0.000
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.000
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.000
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
DREB1A Arabidopsis thaliana AT4G25480 D 0.000
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.000
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.000
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.000
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.000
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.000
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000
PK23332.1 Cannabis sativa PK23332.1 I 0.000
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.000
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.000
Bo7g110320 Brassica oleracea Bo7g110320 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bra019162 Brassica rapa Bra019162 I 0.000
Bra022770 Brassica rapa Bra022770 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.000
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.000
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.000
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.000
GSMUA_Achr2G20280_001 Musa acuminata GSMUA_Achr2G20280_001 I 0.000
GSMUA_Achr6G13340_001 Musa acuminata GSMUA_Achr6G13340_001 I 0.000
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.000
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.000
30147.m014313 Ricinus communis 30147.m014313 I 0.000
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.000
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.000
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.000
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.000
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.000
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.000
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.000
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.000
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000