Bostr.10273s0411 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.10273s0411 T257566_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10273s0411.1.p MADS box 10 55

Links

Other MADS box family TFs
Other Boechera stricta TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL65 Arabidopsis thaliana AT1G18750 D 0.717
MDP0000773068 Malus domestica MDP0000773068 I 0.848
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.870
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.761
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.717
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.826
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.913
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.717
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.717
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.826
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.913
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.870
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.804
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.804
MDP0000146231 Malus domestica MDP0000146231 I 0.826
MDP0000146415 Malus domestica MDP0000146415 I 0.848
MDP0000147667 Malus domestica MDP0000147667 I 0.848
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.826
MDP0000919323 Malus domestica MDP0000919323 I 0.848
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.870
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.717
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.717
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.870
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.739
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.717
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.826
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.761
PK03147.1 Cannabis sativa PK03147.1 I 0.870
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.783
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.739
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.717
29813.m001508 Ricinus communis 29813.m001508 I 0.848
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.783
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.739
AGL30 Arabidopsis thaliana AT2G03060 I 0.804
Bo6g109050 Brassica oleracea Bo6g109050 I 0.826
Bo7g080890 Brassica oleracea Bo7g080890 I 0.783
Bo8g068060 Brassica oleracea Bo8g068060 I 0.717
Bo8g104060 Brassica oleracea Bo8g104060 I 0.717
Bra004393 Brassica rapa Bra004393 I 0.826
Bra016544 Brassica rapa Bra016544 I 0.717
Bra017404 Brassica rapa Bra017404 I 0.804
Bra024792 Brassica rapa Bra024792 I 0.783
Bra031049 Brassica rapa Bra031049 I 0.717
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.717
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.804
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.717
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.826
Pm006479 Prunus mume Pm006479 I 0.870
Cla010361 Citrullus lanatus Cla010361 I 0.804
Ca_18082 Cicer arietinum Ca_18082 I 0.804
Ca_16376 Cicer arietinum Ca_16376 I 0.826
TCM_011687 Theobroma cacao TCM_011687 I 0.826
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.870
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.870
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.848
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.826
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.870
Bo9g072860 Brassica oleracea Bo9g072860 N 0.783
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.826
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.804
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.761
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.739
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.783
AGL94 Arabidopsis thaliana AT1G69540 N 0.891
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.913
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.761