Gorai.013G210600 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.013G210600 T258511_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G210600.1 MADS box 10 54

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL5 Arabidopsis thaliana AT3G15270 D
SPL13A Arabidopsis thaliana AT5G50670 D
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I
AMTR_s00022p00106940 Amborella trichopoda AMTR_s00022p00106940 I
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I
SPL6 Arabidopsis thaliana AT1G69170 I
SPL13A Arabidopsis thaliana AT5G50570 I
BGIOSGA005075 Oryza indica BGIOSGA005075 I
BGIOSGA016888 Oryza indica BGIOSGA016888 I
SPL15 Oryza indica BGIOSGA028994 I
Bo2g062840 Brassica oleracea Bo2g062840 I
Bo3g024180 Brassica oleracea Bo3g024180 I
Bo3g042890 Brassica oleracea Bo3g042890 I
Bo6g031220 Brassica oleracea Bo6g031220 I
Bo9g097630 Brassica oleracea Bo9g097630 I
Bra022766 Brassica rapa Bra022766 I
Bra038324 Brassica rapa Bra038324 I
Bra039656 Brassica rapa Bra039656 I
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I
BRADI3G40240 Brachypodium distachyon BRADI3G40240 I
F775_02791 Aegilops tauschii F775_02791 I
F775_27970 Aegilops tauschii F775_27970 I
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I
GLYMA0005S50 Glycine max GLYMA0005S50 I
GLYMA01G08056 Glycine max GLYMA01G08056 I
GLYMA02G13371 Glycine max GLYMA02G13371 I
GLYMA04G32002 Glycine max GLYMA04G32002 I
GLYMA04G37391 Glycine max GLYMA04G37391 I
GLYMA05G38180 Glycine max GLYMA05G38180 I
GLYMA06G17700 Glycine max GLYMA06G17700 I
GLYMA07G14641 Glycine max GLYMA07G14641 I
GLYMA08G01450 Glycine max GLYMA08G01450 I
GLYMA11G16556 Glycine max GLYMA11G16556 I
GLYMA13G31090 Glycine max GLYMA13G31090 I
GLYMA16G05895 Glycine max GLYMA16G05895 I
GLYMA17G08840 Glycine max GLYMA17G08840 I
GLYMA19G26390 Glycine max GLYMA19G26390 I
GRMZM2G148467 Zea mays GRMZM2G148467 I
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I
GSMUA_Achr7G20620_001 Musa acuminata GSMUA_Achr7G20620_001 I
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I
LPERR01G36700 Leersia perrieri LPERR01G36700 I
LPERR04G17030 Leersia perrieri LPERR04G17030 I
LPERR08G17180 Leersia perrieri LPERR08G17180 I
LPERR11G11330 Leersia perrieri LPERR11G11330 I
MLOC_13032 Hordeum vulgare MLOC_13032 I
MLOC_4792 Hordeum vulgare MLOC_4792 I
MLOC_52321 Hordeum vulgare MLOC_52321 I
MLOC_69667 Hordeum vulgare MLOC_69667 I
MTR_2g461920 Medicago truncatula MTR_2g461920 I
MTR_3g099080 Medicago truncatula MTR_3g099080 I
MTR_4g109770 Medicago truncatula MTR_4g109770 I
MTR_5g046670 Medicago truncatula MTR_5g046670 I
MTR_7g028740 Medicago truncatula MTR_7g028740 I
MTR_7g444860 Medicago truncatula MTR_7g444860 I
MTR_8g096780 Medicago truncatula MTR_8g096780 I
OB04G27960 Oryza brachyantha OB04G27960 I
OBART01G42150 Oryza barthii OBART01G42150 I
OBART04G20940 Oryza barthii OBART04G20940 I
OBART08G20320 Oryza barthii OBART08G20320 I
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I
OGLUM08G21580 Oryza glumaepatula OGLUM08G21580 I
OLONG_014873 Oryza longistaminata OLONG_014873 I
OMERI01G39190 Oryza meridionalis OMERI01G39190 I
OMERI02G02300 Oryza meridionalis OMERI02G02300 I
OMERI04G17360 Oryza meridionalis OMERI04G17360 I
OMERI11G11920 Oryza meridionalis OMERI11G11920 I
ONIVA01G48230 Oryza nivara ONIVA01G48230 I
ONIVA04G19190 Oryza nivara ONIVA04G19190 I
ONIVA08G22940 Oryza nivara ONIVA08G22940 I
OPUNC01G41070 Oryza punctata OPUNC01G41070 I
OPUNC04G18620 Oryza punctata OPUNC04G18620 I
OPUNC08G18470 Oryza punctata OPUNC08G18470 I
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I
ORGLA08G0179900 Oryza glaberrima ORGLA08G0179900 I
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I
ORUFI08G22780 Oryza rufipogon ORUFI08G22780 I
OS01G0922600 Oryza sativa OS01G0922600 I
SPL7 Oryza sativa OS04G0551500 I
SPL19 Oryza sativa OS11G0496600 I
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I
PRUPE_ppa007202mg Prunus persica PRUPE_ppa007202mg I
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I
Sb03g044160 Sorghum bicolor Sb03g044160 I
Sb05g017510 Sorghum bicolor Sb05g017510 I
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I
SELMODRAFT_28595 Selaginella moellendorffii SELMODRAFT_28595 I
SELMODRAFT_28598 Selaginella moellendorffii SELMODRAFT_28598 I
SELMODRAFT_28630 Selaginella moellendorffii SELMODRAFT_28630 I
Si001804m.g Setaria italica Si001804m.g I
Si010262m.g Setaria italica Si010262m.g I
Si026656m.g Setaria italica Si026656m.g I
Si032170m.g Setaria italica Si032170m.g I
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I
TCM_005620 Theobroma cacao TCM_005620 I
TCM_008671 Theobroma cacao TCM_008671 I
TCM_011483 Theobroma cacao TCM_011483 I
TCM_014330 Theobroma cacao TCM_014330 I
TCM_014668 Theobroma cacao TCM_014668 I
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I
Traes_7AS_0F019FB93 Triticum aestivum Traes_7AS_0F019FB93 I
Traes_7DS_AB399594E Triticum aestivum Traes_7DS_AB399594E I
TRIUR3_23102 Triticum urartu TRIUR3_23102 I
TRIUR3_31982 Triticum urartu TRIUR3_31982 I
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I
SPL3 Vitis vinifera VIT_10s0003g00050 I
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I
Ca_01426 Cicer arietinum Ca_01426 I
Ca_05711 Cicer arietinum Ca_05711 I
Ca_10879 Cicer arietinum Ca_10879 I
Ca_19449 Cicer arietinum Ca_19449 I
Ca_24655 Cicer arietinum Ca_24655 I
Ca_24733 Cicer arietinum Ca_24733 I
Cla001541 Citrullus lanatus Cla001541 I
Cla002666 Citrullus lanatus Cla002666 I
Cla018827 Citrullus lanatus Cla018827 I
Cla019331 Citrullus lanatus Cla019331 I
Cla019579 Citrullus lanatus Cla019579 I
Cla021411 Citrullus lanatus Cla021411 I
Pm010075 Prunus mume Pm010075 I
Pm016138 Prunus mume Pm016138 I
Pm024528 Prunus mume Pm024528 I
Pm025028 Prunus mume Pm025028 I
Pm030597 Prunus mume Pm030597 I
29929.m004627 Ricinus communis 29929.m004627 I
30138.m003942 Ricinus communis 30138.m003942 I
30174.m008805 Ricinus communis 30174.m008805 I
30174.m009082 Ricinus communis 30174.m009082 I
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I
cassava39122.m1 Manihot esculenta cassava39122.m1 I
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I
Cucsa.113410 Cucumis sativus Cucsa.113410 I
Cucsa.157230 Cucumis sativus Cucsa.157230 I
Cucsa.198630 Cucumis sativus Cucsa.198630 I
Cucsa.259800 Cucumis sativus Cucsa.259800 I
Cucsa.272530 Cucumis sativus Cucsa.272530 I
Cucsa.349620 Cucumis sativus Cucsa.349620 I
Cucsa.392170 Cucumis sativus Cucsa.392170 I
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I
Cagra.0007s0069 Capsella grandiflora Cagra.0007s0069 I
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I
Carubv10014636m.g Capsella rubella Carubv10014636m.g I
Carubv10020369m.g Capsella rubella Carubv10020369m.g I
Carubv10026628m.g Capsella rubella Carubv10026628m.g I
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I
Eucgr.K02545 Eucalyptus grandis Eucgr.K02545 I
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I
Lus10000643.g Linum usitatissimum Lus10000643.g I
Lus10007984.g Linum usitatissimum Lus10007984.g I
Lus10011348.g Linum usitatissimum Lus10011348.g I
Lus10013999.g Linum usitatissimum Lus10013999.g I
Lus10015421.g Linum usitatissimum Lus10015421.g I
Lus10015764.g Linum usitatissimum Lus10015764.g I
Lus10018610.g Linum usitatissimum Lus10018610.g I
Lus10021034.g Linum usitatissimum Lus10021034.g I
Lus10021141.g Linum usitatissimum Lus10021141.g I
Lus10023818.g Linum usitatissimum Lus10023818.g I
Lus10039846.g Linum usitatissimum Lus10039846.g I
MDP0000119458 Malus domestica MDP0000119458 I
MDP0000146640 Malus domestica MDP0000146640 I
MDP0000171877 Malus domestica MDP0000171877 I
MDP0000193702 Malus domestica MDP0000193702 I
MDP0000246046 Malus domestica MDP0000246046 I
MDP0000589558 Malus domestica MDP0000589558 I
MDP0000778465 Malus domestica MDP0000778465 I
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I
Pavir.J02262 Panicum virgatum Pavir.J02262 I
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I
PK02140.1 Cannabis sativa PK02140.1 I
PK03565.1 Cannabis sativa PK03565.1 I
PK17790.1 Cannabis sativa PK17790.1 I
PK19500.1 Cannabis sativa PK19500.1 I
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I
PDK_20s1709081g002 Phoenix dactylifera PDK_20s1709081g002 I
Bo6g108620 Brassica oleracea Bo6g108620 N
Bra004363 Brassica rapa Bra004363 N
GLYMA06G22545 Glycine max GLYMA06G22545 N
SELMODRAFT_28634 Selaginella moellendorffii SELMODRAFT_28634 N
SELMODRAFT_28635 Selaginella moellendorffii SELMODRAFT_28635 N
Si013747m.g Setaria italica Si013747m.g N
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N
Lus10003126.g Linum usitatissimum Lus10003126.g N
MDP0000142582 Malus domestica MDP0000142582 N
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N
Pavir.J28847 Panicum virgatum Pavir.J28847 N
Pavir.J30793 Panicum virgatum Pavir.J30793 N