evm.TU.supercontig_2.187 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_2.187 T287102_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.705 0.787
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.687 0.745
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.680 0.766
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.680 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_2.187 Myb 221 271

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL65 Arabidopsis thaliana AT1G18750 D
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I
AGL30 Arabidopsis thaliana AT2G03060 I
Bo6g109050 Brassica oleracea Bo6g109050 I
Bo7g080890 Brassica oleracea Bo7g080890 I
Bo8g104060 Brassica oleracea Bo8g104060 I
Bra004393 Brassica rapa Bra004393 I
Bra016544 Brassica rapa Bra016544 I
Bra024792 Brassica rapa Bra024792 I
Bra025685 Brassica rapa Bra025685 I
Bra031049 Brassica rapa Bra031049 I
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I
F775_13266 Aegilops tauschii F775_13266 I
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I
GLYMA17G10941 Glycine max GLYMA17G10941 I
GRMZM2G441115 Zea mays GRMZM2G441115 I
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I
MLOC_11474 Hordeum vulgare MLOC_11474 I
MTR_4g108720 Medicago truncatula MTR_4g108720 I
MTR_5g041650 Medicago truncatula MTR_5g041650 I
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I
Sb05g025970 Sorghum bicolor Sb05g025970 I
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I
TCM_011687 Theobroma cacao TCM_011687 I
TCM_014051 Theobroma cacao TCM_014051 I
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I
TRIUR3_33223 Triticum urartu TRIUR3_33223 I
AGL65 Vitis vinifera VIT_17s0000g06340 I
Ca_16376 Cicer arietinum Ca_16376 I
Ca_18082 Cicer arietinum Ca_18082 I
Cla010361 Citrullus lanatus Cla010361 I
Cla018884 Citrullus lanatus Cla018884 I
Pm006479 Prunus mume Pm006479 I
Pm024895 Prunus mume Pm024895 I
29813.m001508 Ricinus communis 29813.m001508 I
30138.m004061 Ricinus communis 30138.m004061 I
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I
cassava17346.m1 Manihot esculenta cassava17346.m1 I
cassava19791.m1 Manihot esculenta cassava19791.m1 I
cassava46162.m1 Manihot esculenta cassava46162.m1 I
Cucsa.112840 Cucumis sativus Cucsa.112840 I
Cucsa.284960 Cucumis sativus Cucsa.284960 I
mgf000945m Mimulus guttatus mgf000945m I
mgf004425m Mimulus guttatus mgf004425m I
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I
Carubv10009419m.g Capsella rubella Carubv10009419m.g I
Carubv10017440m.g Capsella rubella Carubv10017440m.g I
Carubv10020210m.g Capsella rubella Carubv10020210m.g I
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I
Lus10019089.g Linum usitatissimum Lus10019089.g I
Lus10026613.g Linum usitatissimum Lus10026613.g I
Lus10030450.g Linum usitatissimum Lus10030450.g I
Lus10034464.g Linum usitatissimum Lus10034464.g I
MDP0000146231 Malus domestica MDP0000146231 I
MDP0000146415 Malus domestica MDP0000146415 I
MDP0000147667 Malus domestica MDP0000147667 I
MDP0000193129 Malus domestica MDP0000193129 I
MDP0000773068 Malus domestica MDP0000773068 I
MDP0000919323 Malus domestica MDP0000919323 I
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I
Pavir.J04162 Panicum virgatum Pavir.J04162 I
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I
PK03147.1 Cannabis sativa PK03147.1 I
PK21701.1 Cannabis sativa PK21701.1 I
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I
BGIOSGA035654 Oryza indica BGIOSGA035654 N
Bo9g072860 Brassica oleracea Bo9g072860 N
GLYMA07G35610 Glycine max GLYMA07G35610 N
GSMUA_Achr11G14240_001 Musa acuminata GSMUA_Achr11G14240_001 N
LPERR11G18320 Leersia perrieri LPERR11G18320 N
OBART11G21780 Oryza barthii OBART11G21780 N
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N
OLONG_008007 Oryza longistaminata OLONG_008007 N
OMERI11G18020 Oryza meridionalis OMERI11G18020 N
OPUNC11G18320 Oryza punctata OPUNC11G18320 N
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N
OS11G0658700 Oryza sativa OS11G0658700 N
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N
AGL33 Populus trichocarpa POPTR_0018s08400 N
Si028357m.g Setaria italica Si028357m.g N
Ciclev10010259m.g Citrus clementina Ciclev10010259m.g N
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N
Gorai.010G096200 Gossypium raimondii Gorai.010G096200 N
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N