MTR_3g066070 (Medicago truncatula)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 MTR_3g066070 T342722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
KEH34629 TBP 57 137
KEH34629 TBP 145 228
KEH34630 TBP 57 134
KEH34630 TBP 142 225
KEH34631 TBP 57 134
KEH34631 TBP 142 225
KEH34632 TBP 57 119
KEH34632 TBP 128 211
KEH34633 TBP 57 119
KEH34633 TBP 128 211
KEH34634 TBP 57 119
KEH34634 TBP 128 211
KEH34635 TBP 7 70
KEH34635 TBP 79 162
KEH34636 TBP 34 117
KEH34637 TBP 57 119
KEH34637 TBP 128 161

Links

Other TBP family TFs
Other Medicago truncatula TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N
29949.m000124 Ricinus communis 29949.m000124 N
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N
BGIOSGA026022 Oryza indica BGIOSGA026022 N
BGIOSGA032058 Oryza indica BGIOSGA032058 N
Bo2g149670 Brassica oleracea Bo2g149670 N
Bo6g022330 Brassica oleracea Bo6g022330 N
Bo7g089080 Brassica oleracea Bo7g089080 N
Bo9g009260 Brassica oleracea Bo9g009260 N
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N
Bra018860 Brassica rapa Bra018860 N
Bra020715 Brassica rapa Bra020715 N
Bra036185 Brassica rapa Bra036185 N
Bra037509 Brassica rapa Bra037509 N
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N
Carubv10008830m.g Capsella rubella Carubv10008830m.g N
Carubv10026289m.g Capsella rubella Carubv10026289m.g N
cassava10826.m1 Manihot esculenta cassava10826.m1 N
cassava34106.m1 Manihot esculenta cassava34106.m1 N
cassava34699.m1 Manihot esculenta cassava34699.m1 N
cassava8885.m1 Manihot esculenta cassava8885.m1 N
Ca_09696 Cicer arietinum Ca_09696 N
Ca_09786 Cicer arietinum Ca_09786 N
Ca_13855 Cicer arietinum Ca_13855 N
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N
CIGR2 Oryza sativa OS07G0583600 N
Cla001429 Citrullus lanatus Cla001429 N
Cla004565 Citrullus lanatus Cla004565 N
Cucsa.042310 Cucumis sativus Cucsa.042310 N
Cucsa.120390 Cucumis sativus Cucsa.120390 N
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N
GLYMA02G46730 Glycine max GLYMA02G46730 N
GLYMA02G47640 Glycine max GLYMA02G47640 N
GLYMA08G43780 Glycine max GLYMA08G43780 N
GLYMA09G22110 Glycine max GLYMA09G22110 N
GLYMA14G01020 Glycine max GLYMA14G01020 N
GLYMA14G01960 Glycine max GLYMA14G01960 N
GLYMA18G09030 Glycine max GLYMA18G09030 N
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N
GRMZM2G431309 Zea mays GRMZM2G431309 N
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N
LPERR07G17460 Leersia perrieri LPERR07G17460 N
Lus10006369.g Linum usitatissimum Lus10006369.g N
Lus10012323.g Linum usitatissimum Lus10012323.g N
Lus10016596.g Linum usitatissimum Lus10016596.g N
MDP0000152670 Malus domestica MDP0000152670 N
MDP0000205236 Malus domestica MDP0000205236 N
MDP0000284679 Malus domestica MDP0000284679 N
MDP0000804652 Malus domestica MDP0000804652 N
MTR_3g056110 Medicago truncatula MTR_3g056110 N
MTR_5g094450 Medicago truncatula MTR_5g094450 N
MTR_5g097480 Medicago truncatula MTR_5g097480 N
OB07G25870 Oryza brachyantha OB07G25870 N
OB10G15940 Oryza brachyantha OB10G15940 N
OBART07G20130 Oryza barthii OBART07G20130 N
OBART10G07700 Oryza barthii OBART10G07700 N
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N
OLONG_015869 Oryza longistaminata OLONG_015869 N
OMERI07G16830 Oryza meridionalis OMERI07G16830 N
OMERI10G05450 Oryza meridionalis OMERI10G05450 N
ONIVA07G18570 Oryza nivara ONIVA07G18570 N
OPUNC07G19030 Oryza punctata OPUNC07G19030 N
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N
PAT1 Arabidopsis thaliana AT5G48150 N
PAT1 Arabidopsis lyrata scaffold_801100.1 N
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N
PK09018.1 Cannabis sativa PK09018.1 N
PK15082.1 Cannabis sativa PK15082.1 N
Pm015021 Prunus mume Pm015021 N
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N
SCL13 Vitis vinifera VIT_00s0463g00020 N
SCL5 Arabidopsis thaliana AT1G50600 N
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N
SCL5 Populus trichocarpa POPTR_0001s37270 N
SCL5 Vitis vinifera VIT_19s0090g01740 N
Si029418m.g Setaria italica Si029418m.g N
Si035052m.g Setaria italica Si035052m.g N
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N
TCM_002319 Theobroma cacao TCM_002319 N
TCM_030733 Theobroma cacao TCM_030733 N
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N