CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_1BL_B8B4C1FB6
(
Triticum aestivum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Traes_1BL_B8B4C1FB6
T021566_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_1BL_B8B4C1FB6.1
B3
184
294
FDKTVTPSDVGKLNRLVIPKQYAEKHFPLQLPSASAVVPGECKGMLLNFDDAVGKMWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSASGNNQLFIDCKIRS
Links
Other
B3
family TFs
Other
Triticum aestivum
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_01779
Aegilops tauschii
F775_01779
I
0.000
F775_02345
Aegilops tauschii
F775_02345
I
0.000
F775_32062
Aegilops tauschii
F775_32062
I
0.000
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.000
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.000
fgenesh2_kg.2__1828__AT1G75490.1
Arabidopsis lyrata
fgenesh2_kg.2__1828__AT1G75490.1
I
0.000
DREB2D
Arabidopsis thaliana
AT1G75490
D
0.000
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.000
Bostr.3288s0201
Boechera stricta
Bostr.3288s0201
I
0.000
BRADI3G12680
Brachypodium distachyon
BRADI3G12680
I
0.000
Bo2g083920
Brassica oleracea
Bo2g083920
I
0.000
Bo6g086320
Brassica oleracea
Bo6g086320
I
0.000
Bo6g119660
Brassica oleracea
Bo6g119660
I
0.000
Bra003752
Brassica rapa
Bra003752
I
0.000
Bra008200
Brassica rapa
Bra008200
I
0.000
Bra015840
Brassica rapa
Bra015840
I
0.000
Cagra.0799s0022
Capsella grandiflora
Cagra.0799s0022
I
0.000
Carubv10020960m.g
Capsella rubella
Carubv10020960m.g
I
0.000
evm.TU.supercontig_99.20
Carica papaya
evm.TU.supercontig_99.20
I
0.000
Ca_10770
Cicer arietinum
Ca_10770
I
0.000
Cla021113
Citrullus lanatus
Cla021113
I
0.000
Cla022803
Citrullus lanatus
Cla022803
I
0.000
Ciclev10002280m.g
Citrus clementina
Ciclev10002280m.g
I
0.000
Ciclev10022244m.g
Citrus clementina
Ciclev10022244m.g
I
0.000
orange1.1g036655m.g
Citrus sinensis
orange1.1g036655m.g
I
0.000
Cucsa.231820
Cucumis sativus
Cucsa.231820
I
0.000
Cucsa.342750
Cucumis sativus
Cucsa.342750
I
0.000
Eucgr.F01607
Eucalyptus grandis
Eucgr.F01607
I
0.000
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.000
Thhalv10019142m.g
Eutrema salsugineum
Thhalv10019142m.g
I
0.000
gene08479-v1.0-hybrid
Fragaria vesca
gene08479-v1.0-hybrid
I
0.000
gene16710-v1.0-hybrid
Fragaria vesca
gene16710-v1.0-hybrid
I
0.000
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.000
GLYMA04G03070
Glycine max
GLYMA04G03070
I
0.000
GLYMA06G03110
Glycine max
GLYMA06G03110
I
0.000
GLYMA14G07620
Glycine max
GLYMA14G07620
I
0.000
GLYMA17G37350
Glycine max
GLYMA17G37350
I
0.000
Gorai.005G110100
Gossypium raimondii
Gorai.005G110100
I
0.000
Gorai.007G271900
Gossypium raimondii
Gorai.007G271900
I
0.000
Gorai.009G197800
Gossypium raimondii
Gorai.009G197800
I
0.000
Gorai.009G271400
Gossypium raimondii
Gorai.009G271400
I
0.000
MLOC_12223
Hordeum vulgare
MLOC_12223
I
0.000
MLOC_66580
Hordeum vulgare
MLOC_66580
I
0.000
LPERR08G12790
Leersia perrieri
LPERR08G12790
I
0.000
LPERR08G20650
Leersia perrieri
LPERR08G20650
I
0.000
Lus10006127.g
Linum usitatissimum
Lus10006127.g
I
0.000
Lus10024298.g
Linum usitatissimum
Lus10024298.g
I
0.000
chr1.CM0195.510.nd
Lotus japonicus
chr1.CM0195.510.nd
I
0.000
LjSGA_063888.1
Lotus japonicus
LjSGA_063888.1
I
0.000
MDP0000141335
Malus domestica
MDP0000141335
I
0.000
MDP0000147009
Malus domestica
MDP0000147009
I
0.000
MDP0000165880
Malus domestica
MDP0000165880
I
0.000
MDP0000250924
Malus domestica
MDP0000250924
I
0.000
MDP0000250927
Malus domestica
MDP0000250927
I
0.000
MDP0000295902
Malus domestica
MDP0000295902
I
0.000
MDP0000446783
Malus domestica
MDP0000446783
I
0.000
cassava25887.m1
Manihot esculenta
cassava25887.m1
I
0.000
cassava41240.m1
Manihot esculenta
cassava41240.m1
I
0.000
cassava45031.m1
Manihot esculenta
cassava45031.m1
I
0.000
MTR_1g023170
Medicago truncatula
MTR_1g023170
I
0.000
mgf017629m
Mimulus guttatus
mgf017629m
I
0.000
mgf024545m
Mimulus guttatus
mgf024545m
I
0.000
OB08G30790
Oryza brachyantha
OB08G30790
I
0.000
ORGLA08G0193700
Oryza glaberrima
ORGLA08G0193700
I
0.000
OGLUM08G25470
Oryza glumaepatula
OGLUM08G25470
I
0.000
BGIOSGA026461
Oryza indica
BGIOSGA026461
I
0.000
BGIOSGA026464
Oryza indica
BGIOSGA026464
I
0.000
OMERI08G18820
Oryza meridionalis
OMERI08G18820
I
0.000
ONIVA09G01190
Oryza nivara
ONIVA09G01190
I
0.000
OPUNC08G21890
Oryza punctata
OPUNC08G21890
I
0.000
ORUFI08G26490
Oryza rufipogon
ORUFI08G26490
I
0.000
DREB2C
Oryza sativa
OS08G0565200
I
0.000
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.000
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.000
Pavir.J22169
Panicum virgatum
Pavir.J22169
I
0.000
Pavir.J25464
Panicum virgatum
Pavir.J25464
I
0.000
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
0.000
POPTR_0002s03090
Populus trichocarpa
POPTR_0002s03090
I
0.000
POPTR_0005s25470
Populus trichocarpa
POPTR_0005s25470
I
0.000
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.000
Pm003634
Prunus mume
Pm003634
I
0.000
Pm006274
Prunus mume
Pm006274
I
0.000
Pm018989
Prunus mume
Pm018989
I
0.000
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.000
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.000
PRUPE_ppa023248mg
Prunus persica
PRUPE_ppa023248mg
I
0.000
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.000
30170.m014115
Ricinus communis
30170.m014115
I
0.000
SapurV1A.0188s0060
Salix purpurea
SapurV1A.0188s0060
I
0.000
SELMODRAFT_38498
Selaginella moellendorffii
SELMODRAFT_38498
N
0.000
SELMODRAFT_38500
Selaginella moellendorffii
SELMODRAFT_38500
N
0.000
Si022619m.g
Setaria italica
Si022619m.g
I
0.000
Si024059m.g
Setaria italica
Si024059m.g
I
0.000
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
0.000
Solyc04g080910.1
Solanum lycopersicum
Solyc04g080910.1
I
0.000
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.000
PGSC0003DMG400003706
Solanum tuberosum
PGSC0003DMG400003706
I
0.000
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.000
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
0.000
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.000
TCM_026121
Theobroma cacao
TCM_026121
I
0.000
TCM_034132
Theobroma cacao
TCM_034132
I
0.000
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.000
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.000
Traes_2AL_3FB37A3E7
Triticum aestivum
Traes_2AL_3FB37A3E7
I
0.000
Traes_2BL_B397F2CE3
Triticum aestivum
Traes_2BL_B397F2CE3
I
0.000
Traes_2DL_B32203C91
Triticum aestivum
Traes_2DL_B32203C91
I
0.000
TRIUR3_03342
Triticum urartu
TRIUR3_03342
N
0.000
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.000
VIT_18s0001g13320
Vitis vinifera
VIT_18s0001g13320
I
0.000
GRMZM2G006745
Zea mays
GRMZM2G006745
I
0.000
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.000