CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_269864
(
Schizophyllum commune
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SCHCODRAFT_269864
T223053_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ02595
Homeodomain
100
139
LLNHLHNPYPTREEREDLARQSSSDIKSITAWFVTARQRI
Links
Other
Homeodomain
family TFs
Other
Schizophyllum commune
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_20715
Aegilops tauschii
F775_20715
I
F775_21760
Aegilops tauschii
F775_21760
I
F775_25656
Aegilops tauschii
F775_25656
I
AMTR_s00066p00120340
Amborella trichopoda
AMTR_s00066p00120340
I
Aquca_007_00083
Aquilegia coerulea
Aquca_007_00083
I
Aquca_011_00559
Aquilegia coerulea
Aquca_011_00559
I
Aquca_058_00006
Aquilegia coerulea
Aquca_058_00006
I
Aquca_061_00084
Aquilegia coerulea
Aquca_061_00084
I
AS2
Arabidopsis lyrata
fgenesh2_kg.2__796__AT1G65620.2
I
LBD25
Arabidopsis lyrata
fgenesh2_kg.5__545__AT3G27650.1
I
LOB
Arabidopsis lyrata
scaffold_802995.1
I
LBD6
Arabidopsis thaliana
AT1G65620
D
LBD25
Arabidopsis thaliana
AT3G27650
I
LOB
Arabidopsis thaliana
AT5G63090
D
Bostr.0556s0446
Boechera stricta
Bostr.0556s0446
I
Bostr.0568s0111
Boechera stricta
Bostr.0568s0111
I
Bostr.0568s0498
Boechera stricta
Bostr.0568s0498
I
Bostr.26959s0351
Boechera stricta
Bostr.26959s0351
I
BRADI2G04270
Brachypodium distachyon
BRADI2G04270
I
BRADI2G25270
Brachypodium distachyon
BRADI2G25270
I
BRADI2G57380
Brachypodium distachyon
BRADI2G57380
I
Bo2g051420
Brassica oleracea
Bo2g051420
I
Bo2g144870
Brassica oleracea
Bo2g144870
I
Bo2g167820
Brassica oleracea
Bo2g167820
I
Bo3g104760
Brassica oleracea
Bo3g104760
I
Bo7g085860
Brassica oleracea
Bo7g085860
I
Bo9g008330
Brassica oleracea
Bo9g008330
I
Bo9g017470
Brassica oleracea
Bo9g017470
I
Bra025294
Brassica rapa
Bra025294
I
Bra033019
Brassica rapa
Bra033019
I
Bra035860
Brassica rapa
Bra035860
I
Bra038606
Brassica rapa
Bra038606
I
Bra039072
Brassica rapa
Bra039072
I
Bra039733
Brassica rapa
Bra039733
I
PK18922.1
Cannabis sativa
PK18922.1
I
PK21510.1
Cannabis sativa
PK21510.1
I
PK26472.1
Cannabis sativa
PK26472.1
I
Cagra.10809s0001
Capsella grandiflora
Cagra.10809s0001
I
Cagra.20099s0001
Capsella grandiflora
Cagra.20099s0001
I
Cagra.5118s0045
Capsella grandiflora
Cagra.5118s0045
I
Cagra.5575s0004
Capsella grandiflora
Cagra.5575s0004
I
Carubv10018238m.g
Capsella rubella
Carubv10018238m.g
I
Carubv10020974m.g
Capsella rubella
Carubv10020974m.g
I
Carubv10026811m.g
Capsella rubella
Carubv10026811m.g
I
Carubv10028397m.g
Capsella rubella
Carubv10028397m.g
I
evm.TU.supercontig_108.62
Carica papaya
evm.TU.supercontig_108.62
I
evm.TU.supercontig_110.17
Carica papaya
evm.TU.supercontig_110.17
I
evm.TU.supercontig_39.110
Carica papaya
evm.TU.supercontig_39.110
I
Ca_07463
Cicer arietinum
Ca_07463
I
Ca_08824
Cicer arietinum
Ca_08824
I
Ca_11161
Cicer arietinum
Ca_11161
I
Ca_20200
Cicer arietinum
Ca_20200
I
Ca_24372
Cicer arietinum
Ca_24372
I
Cla003499
Citrullus lanatus
Cla003499
I
Cla005851
Citrullus lanatus
Cla005851
I
Cla010600
Citrullus lanatus
Cla010600
I
Cla017388
Citrullus lanatus
Cla017388
I
Cla019510
Citrullus lanatus
Cla019510
I
Ciclev10017006m.g
Citrus clementina
Ciclev10017006m.g
I
Ciclev10017910m.g
Citrus clementina
Ciclev10017910m.g
I
Ciclev10022371m.g
Citrus clementina
Ciclev10022371m.g
I
Ciclev10027275m.g
Citrus clementina
Ciclev10027275m.g
I
orange1.1g027472m.g
Citrus sinensis
orange1.1g027472m.g
I
orange1.1g031572m.g
Citrus sinensis
orange1.1g031572m.g
I
orange1.1g036845m.g
Citrus sinensis
orange1.1g036845m.g
I
orange1.1g039589m.g
Citrus sinensis
orange1.1g039589m.g
I
Cucsa.011300
Cucumis sativus
Cucsa.011300
I
Cucsa.098680
Cucumis sativus
Cucsa.098680
I
Cucsa.178830
Cucumis sativus
Cucsa.178830
I
Cucsa.196600
Cucumis sativus
Cucsa.196600
I
Cucsa.250570
Cucumis sativus
Cucsa.250570
I
Cucsa.339980
Cucumis sativus
Cucsa.339980
I
Eucgr.C02148
Eucalyptus grandis
Eucgr.C02148
I
Eucgr.J02237
Eucalyptus grandis
Eucgr.J02237
I
Eucgr.K02809
Eucalyptus grandis
Eucgr.K02809
I
Thhalv10004979m.g
Eutrema salsugineum
Thhalv10004979m.g
I
Thhalv10005120m.g
Eutrema salsugineum
Thhalv10005120m.g
I
Thhalv10019572m.g
Eutrema salsugineum
Thhalv10019572m.g
I
gene21541-v1.0-hybrid
Fragaria vesca
gene21541-v1.0-hybrid
I
gene24088-v1.0-hybrid
Fragaria vesca
gene24088-v1.0-hybrid
I
gene28478-v1.0-hybrid
Fragaria vesca
gene28478-v1.0-hybrid
I
gene31797-v1.0-hybrid
Fragaria vesca
gene31797-v1.0-hybrid
I
GLYMA01G32340
Glycine max
GLYMA01G32340
N
GLYMA04G36080
Glycine max
GLYMA04G36080
I
GLYMA05G02530
Glycine max
GLYMA05G02530
I
GLYMA05G08870
Glycine max
GLYMA05G08870
I
GLYMA06G18861
Glycine max
GLYMA06G18861
I
GLYMA11G17890
Glycine max
GLYMA11G17890
I
GLYMA13G26020
Glycine max
GLYMA13G26020
I
GLYMA15G36310
Glycine max
GLYMA15G36310
I
GLYMA16G07770
Glycine max
GLYMA16G07770
I
GLYMA16G09720
Glycine max
GLYMA16G09720
I
GLYMA17G09380
Glycine max
GLYMA17G09380
I
GLYMA19G00390
Glycine max
GLYMA19G00390
I
GLYMA19G12650
Glycine max
GLYMA19G12650
I
Gorai.006G033100
Gossypium raimondii
Gorai.006G033100
I
Gorai.007G075700
Gossypium raimondii
Gorai.007G075700
I
Gorai.007G210500
Gossypium raimondii
Gorai.007G210500
I
Gorai.007G350300
Gossypium raimondii
Gorai.007G350300
I
Gorai.011G104600
Gossypium raimondii
Gorai.011G104600
I
Gorai.012G063800
Gossypium raimondii
Gorai.012G063800
I
MLOC_61156
Hordeum vulgare
MLOC_61156
I
MLOC_72525
Hordeum vulgare
MLOC_72525
I
LPERR01G04140
Leersia perrieri
LPERR01G04140
I
LPERR01G34430
Leersia perrieri
LPERR01G34430
I
Lus10013610.g
Linum usitatissimum
Lus10013610.g
I
Lus10022264.g
Linum usitatissimum
Lus10022264.g
I
Lus10027676.g
Linum usitatissimum
Lus10027676.g
I
Lus10039940.g
Linum usitatissimum
Lus10039940.g
I
chr1.CM0171.410.nc
Lotus japonicus
chr1.CM0171.410.nc
I
chr2.LjT30P12.80.nc
Lotus japonicus
chr2.LjT30P12.80.nc
I
LjSGA_042891.1
Lotus japonicus
LjSGA_042891.1
I
MDP0000130659
Malus domestica
MDP0000130659
I
MDP0000254288
Malus domestica
MDP0000254288
I
MDP0000273432
Malus domestica
MDP0000273432
I
MDP0000643326
Malus domestica
MDP0000643326
I
MDP0000848210
Malus domestica
MDP0000848210
I
cassava1141.valid.m1
Manihot esculenta
cassava1141.valid.m1
I
cassava12464.valid.m1
Manihot esculenta
cassava12464.valid.m1
I
cassava19770.m1
Manihot esculenta
cassava19770.m1
I
cassava32690.m1
Manihot esculenta
cassava32690.m1
I
cassava33952.m1
Manihot esculenta
cassava33952.m1
I
cassava3724.m1
Manihot esculenta
cassava3724.m1
I
MTR_3g077240
Medicago truncatula
MTR_3g077240
I
MTR_4g105170
Medicago truncatula
MTR_4g105170
I
MTR_6g005070
Medicago truncatula
MTR_6g005070
I
MTR_6g005080
Medicago truncatula
MTR_6g005080
I
MTR_7g033800
Medicago truncatula
MTR_7g033800
I
MTR_8g040900
Medicago truncatula
MTR_8g040900
I
mgf003146m
Mimulus guttatus
mgf003146m
I
mgf014755m
Mimulus guttatus
mgf014755m
I
mgf016361m
Mimulus guttatus
mgf016361m
I
mgf024603m
Mimulus guttatus
mgf024603m
I
OBART01G04470
Oryza barthii
OBART01G04470
I
OBART01G39990
Oryza barthii
OBART01G39990
I
OB01G14220
Oryza brachyantha
OB01G14220
I
OB01G48740
Oryza brachyantha
OB01G48740
I
OB05G24560
Oryza brachyantha
OB05G24560
I
ORGLA01G0040900
Oryza glaberrima
ORGLA01G0040900
I
ORGLA01G0339000
Oryza glaberrima
ORGLA01G0339000
I
ORGLA05G0143500
Oryza glaberrima
ORGLA05G0143500
I
OGLUM01G04900
Oryza glumaepatula
OGLUM01G04900
I
OGLUM01G44190
Oryza glumaepatula
OGLUM01G44190
I
OGLUM05G17630
Oryza glumaepatula
OGLUM05G17630
I
LBD6
Oryza indica
BGIOSGA004955
I
BGIOSGA018046
Oryza indica
BGIOSGA018046
I
OLONG_009404
Oryza longistaminata
OLONG_009404
I
OLONG_016086
Oryza longistaminata
OLONG_016086
I
OMERI01G04420
Oryza meridionalis
OMERI01G04420
I
OMERI01G36900
Oryza meridionalis
OMERI01G36900
I
ONIVA01G04930
Oryza nivara
ONIVA01G04930
I
ONIVA01G44840
Oryza nivara
ONIVA01G44840
I
OPUNC01G38680
Oryza punctata
OPUNC01G38680
I
ORUFI01G04670
Oryza rufipogon
ORUFI01G04670
I
ORUFI01G43320
Oryza rufipogon
ORUFI01G43320
I
ORUFI05G17830
Oryza rufipogon
ORUFI05G17830
I
OS01G0169400
Oryza sativa
OS01G0169400
I
LBD6
Oryza sativa
OS01G0889400
I
OS05G0417000
Oryza sativa
OS05G0417000
I
Pavir.Ea03589
Panicum virgatum
Pavir.Ea03589
I
Pavir.Eb00458
Panicum virgatum
Pavir.Eb00458
I
Pavir.J16692
Panicum virgatum
Pavir.J16692
I
Pavir.J38993
Panicum virgatum
Pavir.J38993
I
gw1.12.172.1
Physcomitrella patens
gw1.12.172.1
I
gw1.170.36.1
Physcomitrella patens
gw1.170.36.1
I
gw1.170.40.1
Physcomitrella patens
gw1.170.40.1
I
gw1.71.84.1
Physcomitrella patens
gw1.71.84.1
I
POPTR_0001s35280
Populus trichocarpa
POPTR_0001s35280
I
POPTR_0007s11460
Populus trichocarpa
POPTR_0007s11460
I
POPTR_0008s07930
Populus trichocarpa
POPTR_0008s07930
I
POPTR_0010s18460
Populus trichocarpa
POPTR_0010s18460
I
POPTR_0012s08540
Populus trichocarpa
POPTR_0012s08540
I
POPTR_0015s09370
Populus trichocarpa
POPTR_0015s09370
I
Pm015649
Prunus mume
Pm015649
I
Pm024312
Prunus mume
Pm024312
I
Pm026450
Prunus mume
Pm026450
I
PRUPE_ppa018381mg
Prunus persica
PRUPE_ppa018381mg
I
PRUPE_ppa023059mg
Prunus persica
PRUPE_ppa023059mg
I
PRUPE_ppa026393mg
Prunus persica
PRUPE_ppa026393mg
I
PRUPE_ppa027059mg
Prunus persica
PRUPE_ppa027059mg
I
29676.m001633
Ricinus communis
29676.m001633
I
29917.m001993
Ricinus communis
29917.m001993
I
29929.m004500
Ricinus communis
29929.m004500
I
30147.m013890
Ricinus communis
30147.m013890
I
SapurV1A.0011s0490
Salix purpurea
SapurV1A.0011s0490
I
SapurV1A.0093s0490
Salix purpurea
SapurV1A.0093s0490
I
SapurV1A.0164s0090
Salix purpurea
SapurV1A.0164s0090
I
SapurV1A.0428s0090
Salix purpurea
SapurV1A.0428s0090
I
SapurV1A.0641s0140
Salix purpurea
SapurV1A.0641s0140
I
SapurV1A.0811s0020
Salix purpurea
SapurV1A.0811s0020
I
SapurV1A.1247s0030
Salix purpurea
SapurV1A.1247s0030
I
SapurV1A.1328s0080
Salix purpurea
SapurV1A.1328s0080
I
SELMODRAFT_59324
Selaginella moellendorffii
SELMODRAFT_59324
I
SELMODRAFT_68988
Selaginella moellendorffii
SELMODRAFT_68988
I
Si002599m.g
Setaria italica
Si002599m.g
I
Si002632m.g
Setaria italica
Si002632m.g
I
Si024114m.g
Setaria italica
Si024114m.g
I
Si036905m.g
Setaria italica
Si036905m.g
I
Solyc02g067800.2
Solanum lycopersicum
Solyc02g067800.2
I
Solyc02g086480.1
Solanum lycopersicum
Solyc02g086480.1
I
Solyc03g063140.2
Solanum lycopersicum
Solyc03g063140.2
I
Solyc03g112430.1
Solanum lycopersicum
Solyc03g112430.1
I
Solyc06g071660.1
Solanum lycopersicum
Solyc06g071660.1
I
Solyc11g008830.1
Solanum lycopersicum
Solyc11g008830.1
I
PGSC0003DMG400000974
Solanum tuberosum
PGSC0003DMG400000974
I
PGSC0003DMG400006914
Solanum tuberosum
PGSC0003DMG400006914
I
PGSC0003DMG400012629
Solanum tuberosum
PGSC0003DMG400012629
I
PGSC0003DMG400018112
Solanum tuberosum
PGSC0003DMG400018112
I
PGSC0003DMG400027078
Solanum tuberosum
PGSC0003DMG400027078
I
Sb03g004590
Sorghum bicolor
Sb03g004590
I
Sb03g042310
Sorghum bicolor
Sb03g042310
I
TCM_000560
Theobroma cacao
TCM_000560
I
TCM_012190
Theobroma cacao
TCM_012190
I
TCM_016952
Theobroma cacao
TCM_016952
I
TCM_024217
Theobroma cacao
TCM_024217
I
Traes_1AL_4B89B33E3
Triticum aestivum
Traes_1AL_4B89B33E3
I
TRAES3BF084400010CFD_g
Triticum aestivum
TRAES3BF084400010CFD_g
I
TRIUR3_10339
Triticum urartu
TRIUR3_10339
I
TRIUR3_23928
Triticum urartu
TRIUR3_23928
I
TRIUR3_32863
Triticum urartu
TRIUR3_32863
I
AS2
Vitis vinifera
VIT_00s0340g00090
I
VIT_00s1247g00010
Vitis vinifera
VIT_00s1247g00010
I
VIT_07s0197g00020
Vitis vinifera
VIT_07s0197g00020
I
LBD25
Vitis vinifera
VIT_14s0066g00680
I
LOB
Vitis vinifera
VIT_17s0000g09010
I
AC233943.1_FG002
Zea mays
AC233943.1_FG002
I
GRMZM2G118250
Zea mays
GRMZM2G118250
I