CBG06387 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG06387 T301477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.945 0.629
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.945 0.629
CBG01250
M02391_2.00 		Caenorhabditis briggsae
WBYGTGTC
GACACRVW		 PBM
Weirauch et al.(2014)
pTH6110 		0.886 0.586
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.847 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG06387 Nuclear receptor 47 117

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.867
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.838
CBN18082 Caenorhabditis brenneri CBN18082 I 0.780
CBN15241 Caenorhabditis brenneri CBN15241 I 0.836
CBN03087 Caenorhabditis brenneri CBN03087 I 0.835
CBN00299 Caenorhabditis brenneri CBN00299 I 0.880
CBG01235 Caenorhabditis briggsae CBG01235 I 0.836
CBG01233 Caenorhabditis briggsae CBG01233 N 0.751
CBG27350 Caenorhabditis briggsae CBG27350 I 0.869
CBG19144 Caenorhabditis briggsae CBG19144 I 0.805
CBG19141 Caenorhabditis briggsae CBG19141 I 0.916
CBG17906 Caenorhabditis briggsae CBG17906 I 0.831
CBG15881 Caenorhabditis briggsae CBG15881 I 0.793
CBG09567 Caenorhabditis briggsae CBG09567 I 0.864
CBG06609 Caenorhabditis briggsae CBG06609 I 0.759
CBG06599 Caenorhabditis briggsae CBG06599 I 0.759
CBG01353 Caenorhabditis briggsae CBG01353 I 0.826
CBG01352 Caenorhabditis briggsae CBG01352 I 0.758
CBG01251 Caenorhabditis briggsae CBG01251 I 0.785
CBG17898 Caenorhabditis briggsae CBG17898 I 0.781
CBG01250 Caenorhabditis briggsae CBG01250 D 0.886
CBG01243 Caenorhabditis briggsae CBG01243 I 0.758
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.847
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.862
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.988
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.866
nhr-125 Caenorhabditis elegans WBGene00003715 I 0.749
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.768
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.763
nhr-99 Caenorhabditis elegans WBGene00003689 I 0.754
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.902
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.834
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.945
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.844
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.861
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.864
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.780
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.798
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.893
CJA19466 Caenorhabditis japonica CJA19466 I 0.977
CJA03572 Caenorhabditis japonica CJA03572 I 0.889
CRE14847 Caenorhabditis remanei CRE14847 I 0.884
CRE18699 Caenorhabditis remanei CRE18699 I 0.901
CRE01447 Caenorhabditis remanei CRE01447 N 0.765
CRE05044 Caenorhabditis remanei CRE05044 I 0.819
CRE05778 Caenorhabditis remanei CRE05778 I 0.820
CRE08749 Caenorhabditis remanei CRE08749 I 0.852
CRE08750 Caenorhabditis remanei CRE08750 N 0.750
CRE08751 Caenorhabditis remanei CRE08751 I 0.836
CRE08753 Caenorhabditis remanei CRE08753 I 0.887
CRE08754 Caenorhabditis remanei CRE08754 I 0.921
CRE08760 Caenorhabditis remanei CRE08760 I 0.809
CRE08762 Caenorhabditis remanei CRE08762 I 0.748
CRE11350 Caenorhabditis remanei CRE11350 N 0.763
CRE14845 Caenorhabditis remanei CRE14845 I 0.860
CRE14848 Caenorhabditis remanei CRE14848 I 0.856
CRE18698 Caenorhabditis remanei CRE18698 I 0.878
CRE30948 Caenorhabditis remanei CRE30948 I 0.835
CRE08755 Caenorhabditis remanei CRE08755 I 0.942
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.823
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.838
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.838
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.823
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.842
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.787
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.803
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.818
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.753
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.749
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.836