ERF027 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G12630 T000405_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF027
M06566_2.00		 Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a		 (Direct) (Direct)
ERF027
M06567_2.00		 Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.730 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G12630.1 AP2 17 67

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.747
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.747
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.742
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.739
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.739
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.739
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.730
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.727
MDP0000189347 Malus domestica MDP0000189347 I 0.727
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.725
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.725
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.721
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.721
TCM_016176 Theobroma cacao TCM_016176 I 0.721
Cla011673 Citrullus lanatus Cla011673 I 0.716
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.711
Bo9g036590 Brassica oleracea Bo9g036590 I 0.708
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.704
Bra027616 Brassica rapa Bra027616 I 0.704
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.704
Bra027615 Brassica rapa Bra027615 I 0.704
30147.m014311 Ricinus communis 30147.m014311 I 0.701
Cla004491 Citrullus lanatus Cla004491 I 0.696
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.692
MDP0000262710 Malus domestica MDP0000262710 I 0.691
Bra016761 Brassica rapa Bra016761 I 0.688
Bo8g064940 Brassica oleracea Bo8g064940 I 0.688
Bo9g028820 Brassica oleracea Bo9g028820 I 0.688
GRMZM2G434203 Zea mays GRMZM2G434203 I 0.683
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.682