Aquca_013_00433 (Aquilegia coerulea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Aquca_013_00433 T007486_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.748 0.878
ERF027
M06566_2.00 		Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a 		0.727 0.898
ERF027
M06567_2.00 		Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a 		0.727 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_013_00433.1 AP2 7 57

Links

Other AP2 family TFs
Other Aquilegia coerulea TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.755
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.750
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.749
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.749
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.748
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.745
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.745
Cla011673 Citrullus lanatus Cla011673 I 0.744
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.743
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.743
TCM_016176 Theobroma cacao TCM_016176 I 0.742
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.741
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.741
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.741
Bo9g036590 Brassica oleracea Bo9g036590 I 0.733
ERF027 Arabidopsis thaliana AT1G12630 D 0.727
30147.m014311 Ricinus communis 30147.m014311 I 0.725
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.722
Bra027616 Brassica rapa Bra027616 I 0.722
Bra027615 Brassica rapa Bra027615 I 0.722
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.722
MDP0000189347 Malus domestica MDP0000189347 I 0.720
Cla004491 Citrullus lanatus Cla004491 I 0.718
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.714
Bo9g028820 Brassica oleracea Bo9g028820 I 0.713
Bra016761 Brassica rapa Bra016761 I 0.703
Bo8g064940 Brassica oleracea Bo8g064940 I 0.703
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.701
PGSC0003DMG400012527 Solanum tuberosum PGSC0003DMG400012527 I 0.700
GLYMA10G38420 Glycine max GLYMA10G38420 I 0.690
VIT_16s0100g00400 Vitis vinifera VIT_16s0100g00400 I 0.687
MDP0000262710 Malus domestica MDP0000262710 I 0.684
PRUPE_ppa026499mg Prunus persica PRUPE_ppa026499mg I 0.679
Pm023766 Prunus mume Pm023766 I 0.679