Bo3g003800 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo3g003800 T018609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g003800.1 B3 44 151

Links

Other B3 family TFs
Other Brassica oleracea TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra005886 Brassica rapa Bra005886 N 0.970
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.931
Bo9g176470 Brassica oleracea Bo9g176470 N 0.901
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.901
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.901
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.891
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.881
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.881
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.861
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.861
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.861
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.861
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.861
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.861
Bra001411 Brassica rapa Bra001411 N 0.851
Bo3g064320 Brassica oleracea Bo3g064320 N 0.842
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.842
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.832
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.832
Ca_25633 Cicer arietinum Ca_25633 I 0.832
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.832
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.832
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.832
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.832
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.832
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.832
30032.m000462 Ricinus communis 30032.m000462 N 0.822
Bo5g136360 Brassica oleracea Bo5g136360 N 0.822
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.822
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.822
Bra034828 Brassica rapa Bra034828 N 0.822
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.822
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.812
TCM_022729 Theobroma cacao TCM_022729 N 0.812
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.812
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.812
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.812
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.812
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.812
Bra041023 Brassica rapa Bra041023 N 0.812
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.802
Bo01079s020 Brassica oleracea Bo01079s020 N 0.802
ARF31 Arabidopsis thaliana AT2G36080 N 0.802
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.802
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.802
Bra017262 Brassica rapa Bra017262 N 0.802
PK04952.1 Cannabis sativa PK04952.1 I 0.792
Ca_00826 Cicer arietinum Ca_00826 N 0.792
OB12G13420 Oryza brachyantha OB12G13420 N 0.792
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.792
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.792
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.792
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.792
Bo4g035110 Brassica oleracea Bo4g035110 N 0.792
Bra005301 Brassica rapa Bra005301 N 0.792
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.792
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.786
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.782
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.782
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.782
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.772
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.772
Cla017937 Citrullus lanatus Cla017937 I 0.772
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.772
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.772
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.772
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.768
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.762
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.762
mgf019085m Mimulus guttatus mgf019085m N 0.762
MDP0000229742 Malus domestica MDP0000229742 N 0.762
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.762
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.752
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.752
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.752
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.752
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.752
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.752
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.752
OS11G0156000 Oryza sativa OS11G0156000 N 0.752
Si027632m.g Setaria italica Si027632m.g N 0.752
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.752
OBART11G03590 Oryza barthii OBART11G03590 N 0.752
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.752
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.752
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.752
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.752
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.752
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.752
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.752
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.752
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.752
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.752
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.743
OB11G12920 Oryza brachyantha OB11G12920 N 0.743
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.743
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.743
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.743
F775_02500 Aegilops tauschii F775_02500 N 0.733
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.733
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.733
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.733
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.733
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.733
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.723
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.723
mgf018965m Mimulus guttatus mgf018965m N 0.723
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.723
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.723
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.723
Si036864m.g Setaria italica Si036864m.g N 0.723
PK11025.1 Cannabis sativa PK11025.1 I 0.723
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.723
TCM_015590 Theobroma cacao TCM_015590 I 0.723
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.713
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.713
Bra040478 Brassica rapa Bra040478 I 0.713
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.713
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.713
OS04G0581400 Oryza sativa OS04G0581400 I 0.713
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.713
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.713
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.713
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.713
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.713
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.713
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.713
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.713
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.713
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.713
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.713
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.713
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.713
mgf023769m Mimulus guttatus mgf023769m N 0.713
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.713
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.713
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.713
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.713
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.713
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.713
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.713
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.713
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.713
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.713
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.713
Si011823m.g Setaria italica Si011823m.g N 0.713
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.713
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.713
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.713
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.713
OB03G11610 Oryza brachyantha OB03G11610 N 0.713
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.713
TCM_005014 Theobroma cacao TCM_005014 I 0.713
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.713
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.713
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.713
OBART04G22880 Oryza barthii OBART04G22880 I 0.713
OS03G0120900 Oryza sativa OS03G0120900 N 0.713
OBART03G01650 Oryza barthii OBART03G01650 N 0.713
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.713
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.713
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.713
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.713
Pm024248 Prunus mume Pm024248 I 0.713
OBART12G03490 Oryza barthii OBART12G03490 N 0.713
Cla014858 Citrullus lanatus Cla014858 N 0.707
NGA1 Arabidopsis thaliana AT2G46870 N 0.703
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.703
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.703
Bra004501 Brassica rapa Bra004501 N 0.703
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.703
Bo4g006900 Brassica oleracea Bo4g006900 N 0.703
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.703
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.703
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.703
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.703
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.703
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.703
30068.m002615 Ricinus communis 30068.m002615 I 0.703
30076.m004471 Ricinus communis 30076.m004471 I 0.703
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.703
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.703
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.703
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.703
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.703
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.703
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.703
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.703
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.703
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.703
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.703
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.703
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.703
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.703
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.703
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.703