Bo3g064320 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo3g064320 T018630_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g064320.1 B3 32 142

Links

Other B3 family TFs
Other Brassica oleracea TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra001411 Brassica rapa Bra001411 N 0.990
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.951
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.941
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.941
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.941
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.931
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.931
Bra034828 Brassica rapa Bra034828 N 0.921
Bo5g136360 Brassica oleracea Bo5g136360 N 0.911
Bra041023 Brassica rapa Bra041023 N 0.901
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.871
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.871
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.871
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.871
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.871
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.861
Bra005886 Brassica rapa Bra005886 N 0.851
Bo9g176470 Brassica oleracea Bo9g176470 N 0.842
Bo3g003800 Brassica oleracea Bo3g003800 N 0.842
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.838
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.838
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.832
TCM_022729 Theobroma cacao TCM_022729 N 0.828
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.822
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.822
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.822
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.822
Ca_25633 Cicer arietinum Ca_25633 I 0.822
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.812
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.812
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.812
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.812
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.812
30032.m000462 Ricinus communis 30032.m000462 N 0.812
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.812
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.812
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.808
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.802
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.802
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.802
ARF31 Arabidopsis thaliana AT2G36080 N 0.802
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.802
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.802
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.802
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.802
PK04952.1 Cannabis sativa PK04952.1 I 0.802
Ca_00826 Cicer arietinum Ca_00826 N 0.792
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.792
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.792
Bra017262 Brassica rapa Bra017262 N 0.792
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.792
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.792
Bo01079s020 Brassica oleracea Bo01079s020 N 0.792
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.792
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.792
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.782
Bra005301 Brassica rapa Bra005301 N 0.782
Cla017937 Citrullus lanatus Cla017937 I 0.782
Bo4g035110 Brassica oleracea Bo4g035110 N 0.782
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.782
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.772
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.772
MDP0000229742 Malus domestica MDP0000229742 N 0.772
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.772
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.772
OB12G13420 Oryza brachyantha OB12G13420 N 0.772
mgf018965m Mimulus guttatus mgf018965m N 0.768
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.768
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.762
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.762
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.762
mgf019085m Mimulus guttatus mgf019085m N 0.762
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.758
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.757
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.757
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.757
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.752
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.752
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.752
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.752
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.752
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.750
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.747
Si027632m.g Setaria italica Si027632m.g N 0.743
F775_02500 Aegilops tauschii F775_02500 N 0.743
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.743
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.743
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.743
PK11025.1 Cannabis sativa PK11025.1 I 0.743
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.743
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.743
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.743
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.743
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.743
TCM_015590 Theobroma cacao TCM_015590 I 0.743
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.743
Bra040478 Brassica rapa Bra040478 I 0.740
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.737
TCM_005014 Theobroma cacao TCM_005014 I 0.733
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.733
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.733
Pm024248 Prunus mume Pm024248 I 0.733
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.733
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.733
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.733
OBART11G03590 Oryza barthii OBART11G03590 N 0.733
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.733
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.733
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.733
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.733
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.733
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.733
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.733
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.733
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.733
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.733
OS11G0156000 Oryza sativa OS11G0156000 N 0.733
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.733
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.733
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.733
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.733
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.730
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.727
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.723
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.723
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.723
Bra004501 Brassica rapa Bra004501 N 0.723
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.723
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.723
30076.m004471 Ricinus communis 30076.m004471 I 0.723
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.723
Bo4g006900 Brassica oleracea Bo4g006900 N 0.723
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.723
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.723
mgf023769m Mimulus guttatus mgf023769m N 0.723
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.723
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.723
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.723
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.723
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.723
OB03G11610 Oryza brachyantha OB03G11610 N 0.723
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.723
OB11G12920 Oryza brachyantha OB11G12920 N 0.723
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.723
Bo4g197410 Brassica oleracea Bo4g197410 I 0.720
Cla014858 Citrullus lanatus Cla014858 N 0.717
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.713
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.713
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.713
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.713
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.713
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.713
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.713
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.713
OBART04G22880 Oryza barthii OBART04G22880 I 0.713
OBART03G01650 Oryza barthii OBART03G01650 N 0.713
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.713
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.713
OBART12G03490 Oryza barthii OBART12G03490 N 0.713
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.713
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.713
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.713
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.713
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.713
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.713
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.713
Bra000434 Brassica rapa Bra000434 N 0.713
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.713
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.713
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.713
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.713
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.713
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.713
NGA1 Arabidopsis thaliana AT2G46870 N 0.713
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.713
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.713
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.713
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.713
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.713
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.713
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.713
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.713
Si036864m.g Setaria italica Si036864m.g N 0.713
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.713
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.713
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.713
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.713
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.713
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.713
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.713
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.713
OS04G0581400 Oryza sativa OS04G0581400 I 0.713
OS03G0120900 Oryza sativa OS03G0120900 N 0.713
F775_31255 Aegilops tauschii F775_31255 N 0.710
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.710
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.710
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.707
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.703
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.703
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.703
PK21157.1 Cannabis sativa PK21157.1 I 0.703
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.703
Si011823m.g Setaria italica Si011823m.g N 0.703
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.703
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.703
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.703
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.703
Bra007646 Brassica rapa Bra007646 N 0.703
Bra003482 Brassica rapa Bra003482 N 0.703
Bo3g039420 Brassica oleracea Bo3g039420 N 0.703
Bo6g079210 Brassica oleracea Bo6g079210 N 0.703
Bo8g097490 Brassica oleracea Bo8g097490 N 0.703
NGA2 Arabidopsis thaliana AT3G61970 N 0.703
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.703
OB02G35380 Oryza brachyantha OB02G35380 I 0.703
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.703
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.703
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.703
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.703
30068.m002615 Ricinus communis 30068.m002615 I 0.703
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.703
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.703
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.703
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.703
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.703
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.703