Cagra.0993s0119 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.0993s0119 T022735_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0993s0119.1.p B3 38 144

Links

Other B3 family TFs
Other Capsella grandiflora TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 1.000
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.990
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.990
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.990
ARF31 Arabidopsis thaliana AT2G36080 N 0.990
Bra017262 Brassica rapa Bra017262 N 0.980
Bo01079s020 Brassica oleracea Bo01079s020 N 0.970
Bo4g035110 Brassica oleracea Bo4g035110 N 0.960
Bra005301 Brassica rapa Bra005301 N 0.960
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.861
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.861
30032.m000462 Ricinus communis 30032.m000462 N 0.851
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.851
TCM_022729 Theobroma cacao TCM_022729 N 0.848
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.848
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.848
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.842
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.842
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.842
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.842
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.842
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.842
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.832
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.832
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.832
Bra034828 Brassica rapa Bra034828 N 0.832
Ca_00826 Cicer arietinum Ca_00826 N 0.832
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.832
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.832
OB12G13420 Oryza brachyantha OB12G13420 N 0.832
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.832
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.832
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.829
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.828
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.822
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.822
OBART11G03590 Oryza barthii OBART11G03590 N 0.822
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.822
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.822
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.822
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.822
Cla017937 Citrullus lanatus Cla017937 I 0.822
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.822
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.822
Bo5g136360 Brassica oleracea Bo5g136360 N 0.822
PK04952.1 Cannabis sativa PK04952.1 I 0.822
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.822
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.822
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.822
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.822
OS11G0156000 Oryza sativa OS11G0156000 N 0.822
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.818
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.818
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.812
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.812
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.812
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.812
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.812
Ca_25633 Cicer arietinum Ca_25633 I 0.812
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.812
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.812
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.812
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.812
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.812
mgf019085m Mimulus guttatus mgf019085m N 0.812
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.812
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.812
OB11G12920 Oryza brachyantha OB11G12920 N 0.812
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.812
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.811
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.802
Si027632m.g Setaria italica Si027632m.g N 0.802
Bra001411 Brassica rapa Bra001411 N 0.802
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.802
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.802
Bra041023 Brassica rapa Bra041023 N 0.802
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.802
Bo3g064320 Brassica oleracea Bo3g064320 N 0.802
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.802
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.802
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.802
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.802
F775_02500 Aegilops tauschii F775_02500 N 0.802
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.792
Bra005886 Brassica rapa Bra005886 N 0.792
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.792
MDP0000229742 Malus domestica MDP0000229742 N 0.792
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.792
Bo9g176470 Brassica oleracea Bo9g176470 N 0.792
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.792
Bo3g003800 Brassica oleracea Bo3g003800 N 0.792
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.792
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.792
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.792
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.792
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.788
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.787
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.782
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.782
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.782
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.782
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.782
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.782
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.782
mgf018965m Mimulus guttatus mgf018965m N 0.778
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.778
F775_31255 Aegilops tauschii F775_31255 N 0.774
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.772
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.772
OBART12G03490 Oryza barthii OBART12G03490 N 0.772
Si010849m.g Setaria italica Si010849m.g N 0.772
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.772
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.772
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.772
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.772
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.772
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.765
Si036864m.g Setaria italica Si036864m.g N 0.762
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.762
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.760
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.758
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.757
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.752
OS03G0120900 Oryza sativa OS03G0120900 N 0.752
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.752
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.752
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.752
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.752
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.752
OBART03G01650 Oryza barthii OBART03G01650 N 0.752
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.752
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.752
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.752
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.752
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.752
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.752
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.752
PK11025.1 Cannabis sativa PK11025.1 I 0.752
OB03G11610 Oryza brachyantha OB03G11610 N 0.743
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.743
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.743
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.743
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
Cla014858 Citrullus lanatus Cla014858 N 0.737
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.737
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.735
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.733
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.733
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.733
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.733
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.733
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.733
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.733
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.733
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.733
Si011823m.g Setaria italica Si011823m.g N 0.733
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.733
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.733
Pm024248 Prunus mume Pm024248 I 0.733
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.733
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.733
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.733
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.733
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.733
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.733
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.733
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.733
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.733
Bra040478 Brassica rapa Bra040478 I 0.730
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.727
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.726
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.723
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.723
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.723
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.723
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.723
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.723
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.723
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.723
TCM_015590 Theobroma cacao TCM_015590 I 0.723
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.723
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.723
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.723
OBART04G22880 Oryza barthii OBART04G22880 I 0.723
OB02G35380 Oryza brachyantha OB02G35380 I 0.723
OBART02G28100 Oryza barthii OBART02G28100 N 0.723
OS04G0581400 Oryza sativa OS04G0581400 I 0.723
OS02G0683500 Oryza sativa OS02G0683500 N 0.723
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.723
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.723
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.723
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.723
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.723
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.723
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.723
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.723
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.723
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.723
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.723
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.723
TCM_005014 Theobroma cacao TCM_005014 I 0.723
Si039972m.g Setaria italica Si039972m.g N 0.723
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.723
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.713
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.713
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.713
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.713
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.713
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.713
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.713
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.713
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.713
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.713
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.713
OBART10G17010 Oryza barthii OBART10G17010 N 0.713
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.713
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.713
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.713
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.713
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.713
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.713
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.713
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.713
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.713
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.713
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.713
Bo3g039420 Brassica oleracea Bo3g039420 N 0.713
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.713
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.713
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.713
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.713
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.713
Cla006845 Citrullus lanatus Cla006845 I 0.713
Pm028725 Prunus mume Pm028725 N 0.713
30076.m004471 Ricinus communis 30076.m004471 I 0.713
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.713
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.713
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.713
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.713
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.713
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.713
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.713
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.713
OS10G0537100 Oryza sativa OS10G0537100 N 0.713
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.713
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.711
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.710
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.704
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.703
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.703
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.703
Bo4g197410 Brassica oleracea Bo4g197410 I 0.703
Bo4g006900 Brassica oleracea Bo4g006900 N 0.703
Bo6g079210 Brassica oleracea Bo6g079210 N 0.703
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.703
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.703
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.703
NGA1 Arabidopsis thaliana AT2G46870 N 0.703
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.703
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.703
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.703
mgf023769m Mimulus guttatus mgf023769m N 0.703
Bra003482 Brassica rapa Bra003482 N 0.703
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.703
Bra000434 Brassica rapa Bra000434 N 0.703
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.703
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.703
Ca_01368 Cicer arietinum Ca_01368 I 0.703
Bra004501 Brassica rapa Bra004501 N 0.703
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.703
OB01G36520 Oryza brachyantha OB01G36520 I 0.701