Pm008491 (Prunus mume)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pm008491 T028025_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm008491 BED ZF 8 55
Pm008491 BED ZF 131 180

Links

Other BED ZF family TFs
Other Prunus mume TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 1.000
MDP0000314867 Malus domestica MDP0000314867 N 0.964
MDP0000133479 Malus domestica MDP0000133479 N 0.964
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.952
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.952
PK21594.1 Cannabis sativa PK21594.1 N 0.917
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.916
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.893
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.893
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.893
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.893
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.881
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.880
29889.m003394 Ricinus communis 29889.m003394 N 0.880
Bo00763s120 Brassica oleracea Bo00763s120 N 0.877
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.869
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.869
TCM_021492 Theobroma cacao TCM_021492 N 0.857
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.857
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.845
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.845
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.845
TCM_004927 Theobroma cacao TCM_004927 N 0.845
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.845
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.845
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.833
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.833
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.833
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.831
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.821
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.821