cassava36089.valid.m1 (Manihot esculenta)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 cassava36089.valid.m1 T028068_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava36089.valid.m1 BED ZF 11 61
cassava36089.valid.m1 BED ZF 135 182

Links

Other BED ZF family TFs
Other Manihot esculenta TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.964
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.964
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.964
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.964
TCM_004927 Theobroma cacao TCM_004927 N 0.952
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.952
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.940
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.940
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.917
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.917
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.892
29889.m003394 Ricinus communis 29889.m003394 N 0.867
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.857
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.857
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.857
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.857
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.857
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.855
Bo00763s120 Brassica oleracea Bo00763s120 N 0.852
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.845
MDP0000314867 Malus domestica MDP0000314867 N 0.845
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.845
MDP0000133479 Malus domestica MDP0000133479 N 0.845
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.845
Pm008491 Prunus mume Pm008491 N 0.845
PK21594.1 Cannabis sativa PK21594.1 N 0.833
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.833
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.833
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.833
TCM_021492 Theobroma cacao TCM_021492 N 0.821
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.821