OBART06G20890 (Oryza barthii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OBART06G20890 T124645_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G20890.1 C2H2 ZF 141 162
OBART06G20890.1 C2H2 ZF 161 187

Links

Other C2H2 ZF family TFs
Other Oryza barthii TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.811
29908.m006047 Ricinus communis 29908.m006047 N 0.768
30055.m001542 Ricinus communis 30055.m001542 N 0.782
30061.m000294 Ricinus communis 30061.m000294 N 0.782
30169.m006417 Ricinus communis 30169.m006417 N 0.802
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.811
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.797
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.758
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.758
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.797
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.758
WIP6 Arabidopsis thaliana AT1G13290 N 0.797
WIP2 Arabidopsis thaliana AT3G57670 N 0.811
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.803
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.790
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.782
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.767
Bo4g111000 Brassica oleracea Bo4g111000 N 0.811
Bo5g015200 Brassica oleracea Bo5g015200 N 0.797
Bo6g073120 Brassica oleracea Bo6g073120 N 0.811
Bo8g092070 Brassica oleracea Bo8g092070 N 0.811
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.797
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.811
Bra003295 Brassica rapa Bra003295 N 0.811
Bra007346 Brassica rapa Bra007346 N 0.810
Bra014612 Brassica rapa Bra014612 N 0.811
Bra019822 Brassica rapa Bra019822 N 0.797
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.803
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.767
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.782
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.761
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.811
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.797
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.797
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.811
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.782
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.782
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.796
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.811
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.782
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.811
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.768
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.797
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.802
Ca_07051 Cicer arietinum Ca_07051 N 0.758
Ca_07269 Cicer arietinum Ca_07269 N 0.811
Ca_08435 Cicer arietinum Ca_08435 N 0.797
Ca_16482 Cicer arietinum Ca_16482 N 0.777
Ca_21713 Cicer arietinum Ca_21713 N 0.821
Ca_24699 Cicer arietinum Ca_24699 N 0.797
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.811
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.797
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.776
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.768
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.811
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.811
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.782
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.788
Cla000184 Citrullus lanatus Cla000184 N 0.768
Cla002714 Citrullus lanatus Cla002714 N 0.797
Cla008187 Citrullus lanatus Cla008187 N 0.811
Cla008675 Citrullus lanatus Cla008675 N 0.787
Cla015481 Citrullus lanatus Cla015481 N 0.758
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.758
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.758
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.768
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.811
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.797
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.811
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.811
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.797
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.782
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.821
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.767
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.782
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.797
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.811
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.821
F775_14972 Aegilops tauschii F775_14972 N 0.761
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.811
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.788
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.811
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.811
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.782
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.797
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.797
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.811
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.782
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.797
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.782
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.782
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.782
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.782
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.782
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.782
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.782
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.811
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.797
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.782
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.811
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.811
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.758
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.758
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.782
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.811
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.758
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.768
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.797
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.821
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.827
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.767
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.761
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.782
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.803
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.803
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.767
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.768
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.782
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.802
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.821
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.772
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.768
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.782
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.778
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.764
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.782
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.811
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.811
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.821
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.803
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.767
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.782
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.767
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.758
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.758
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.797
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.772
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.811
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.811
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.797
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.772
MDP0000131949 Malus domestica MDP0000131949 N 0.782
MDP0000142494 Malus domestica MDP0000142494 N 0.769
MDP0000144266 Malus domestica MDP0000144266 N 0.770
MDP0000300013 Malus domestica MDP0000300013 N 0.782
MDP0000303483 Malus domestica MDP0000303483 N 0.797
MDP0000403797 Malus domestica MDP0000403797 N 0.811
MDP0000573922 Malus domestica MDP0000573922 N 0.766
MDP0000580545 Malus domestica MDP0000580545 N 0.811
MDP0000601705 Malus domestica MDP0000601705 N 0.811
MDP0000899280 Malus domestica MDP0000899280 N 0.788
mgf019910m Mimulus guttatus mgf019910m N 0.787
mgf022319m Mimulus guttatus mgf022319m N 0.758
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.761
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.782
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.827
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.797
OB06G28740 Oryza brachyantha OB06G28740 N 0.803
OB08G26650 Oryza brachyantha OB08G26650 N 0.767
OBART02G07320 Oryza barthii OBART02G07320 N 0.777
OBART08G19670 Oryza barthii OBART08G19670 N 0.767
OBART09G03640 Oryza barthii OBART09G03640 N 0.790
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.803
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.767
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.790
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.782
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.767
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.767
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.790
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.782
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.767
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.790
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.803
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.782
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.767
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.767
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.803
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.767
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.790
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.782
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.767
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.811
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.768
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.782
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.811
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.788
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.777
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.803
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.767
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.767
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.790
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.803
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.790
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.782
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.767
OS06G0612300 Oryza sativa OS06G0612300 N 0.803
OS08G0504000 Oryza sativa OS08G0504000 N 0.767
OS09G0307400 Oryza sativa OS09G0307400 N 0.782
OS09G0485600 Oryza sativa OS09G0485600 N 0.767
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.761
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.782
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.803
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.767
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.767
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.772
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.758
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.811
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.811
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.787
PK03705.1 Cannabis sativa PK03705.1 N 0.811
Pm000471 Prunus mume Pm000471 N 0.811
Pm001374 Prunus mume Pm001374 N 0.782
Pm025853 Prunus mume Pm025853 N 0.811
Pm029018 Prunus mume Pm029018 N 0.797
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.782
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.759
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.802
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.782
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.782
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.782
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.797
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.811
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.811
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.797
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.782
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.811
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.802
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.811
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.762
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.782
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.758
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.767
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.782
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.761
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.767
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.803
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.821
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.821
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.797
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.797
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.797
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.797
Si006616m.g Setaria italica Si006616m.g N 0.803
Si013819m.g Setaria italica Si013819m.g N 0.767
Si029897m.g Setaria italica Si029897m.g N 0.761
Si030360m.g Setaria italica Si030360m.g N 0.782
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.772
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.787
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.811
TCM_005892 Theobroma cacao TCM_005892 N 0.782
TCM_011858 Theobroma cacao TCM_011858 N 0.797
TCM_024788 Theobroma cacao TCM_024788 N 0.811
TCM_034881 Theobroma cacao TCM_034881 N 0.768
TCM_040610 Theobroma cacao TCM_040610 N 0.821
TCM_041441 Theobroma cacao TCM_041441 N 0.782
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.811
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.797
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.782
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.761
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.761
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.782
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.827
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.761
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.827
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.761
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.782
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.797
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.793
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.782
NTT Vitis vinifera VIT_08s0007g08070 N 0.811
TT1 Vitis vinifera VIT_18s0001g05860 N 0.774