cassava3990.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava3990.m1 T022284_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava3990.m1 B3 83 186

Links

Other B3 family TFs
Other Manihot esculenta TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.724
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.723
Bo4g197410 Brassica oleracea Bo4g197410 I 0.700
Bra040478 Brassica rapa Bra040478 I 0.710
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.723
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.851
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.723
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.861
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.703
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.713
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.733
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.703
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.713
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.723
OB02G35380 Oryza brachyantha OB02G35380 I 0.703
OBART04G22880 Oryza barthii OBART04G22880 I 0.723
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.723
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.723
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.770
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.723
OS04G0581400 Oryza sativa OS04G0581400 I 0.723
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.723
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.723
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.733
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.713
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.703
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.713
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.733
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.848
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.713
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.713
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.723
TCM_005014 Theobroma cacao TCM_005014 I 0.723
TCM_015590 Theobroma cacao TCM_015590 I 0.723
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.707
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.753
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.703
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.703
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.786
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.713
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.733
Ca_25633 Cicer arietinum Ca_25633 I 0.861
Cla006845 Citrullus lanatus Cla006845 I 0.703
Cla017937 Citrullus lanatus Cla017937 I 0.832
Pm024248 Prunus mume Pm024248 I 0.733
30068.m002615 Ricinus communis 30068.m002615 I 0.703
30076.m004471 Ricinus communis 30076.m004471 I 0.713
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.703
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.703
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.822
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.713
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.782
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.782
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.782
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.899
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.703
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.713
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.733
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.842
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.713
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.713
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.723
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.881
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.713
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.713
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.842
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.713
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.713
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.713
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.703
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.899
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.713
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.723
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.713
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.703
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.729
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.792
PK04952.1 Cannabis sativa PK04952.1 I 0.851
PK11025.1 Cannabis sativa PK11025.1 I 0.752
PK21157.1 Cannabis sativa PK21157.1 I 0.713
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.703
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.713
ARF31 Arabidopsis thaliana AT2G36080 N 0.822
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.802
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.792
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.733
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.703
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.802
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.752
Bo01079s020 Brassica oleracea Bo01079s020 N 0.822
Bo3g003800 Brassica oleracea Bo3g003800 N 0.802
Bo3g064320 Brassica oleracea Bo3g064320 N 0.792
Bo4g035110 Brassica oleracea Bo4g035110 N 0.802
Bo5g136360 Brassica oleracea Bo5g136360 N 0.782
Bo6g079210 Brassica oleracea Bo6g079210 N 0.703
Bo9g176470 Brassica oleracea Bo9g176470 N 0.782
Bra001411 Brassica rapa Bra001411 N 0.792
Bra005301 Brassica rapa Bra005301 N 0.802
Bra005886 Brassica rapa Bra005886 N 0.802
Bra017262 Brassica rapa Bra017262 N 0.822
Bra034828 Brassica rapa Bra034828 N 0.782
Bra041023 Brassica rapa Bra041023 N 0.752
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.713
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.782
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.818
F775_02500 Aegilops tauschii F775_02500 N 0.772
F775_31255 Aegilops tauschii F775_31255 N 0.806
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.792
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.762
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.762
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.723
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.703
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.723
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.713
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.713
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.720
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.743
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.733
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.792
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.762
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.723
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.723
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.723
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.752
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.782
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.750
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.818
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.832
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.802
OB03G11610 Oryza brachyantha OB03G11610 N 0.733
OB11G12920 Oryza brachyantha OB11G12920 N 0.792
OB12G13420 Oryza brachyantha OB12G13420 N 0.822
OBART03G01650 Oryza barthii OBART03G01650 N 0.733
OBART10G17010 Oryza barthii OBART10G17010 N 0.703
OBART11G03590 Oryza barthii OBART11G03590 N 0.802
OBART12G03490 Oryza barthii OBART12G03490 N 0.752
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.733
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.703
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.802
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.752
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.802
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.733
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.703
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.802
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.822
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.733
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.802
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.703
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.752
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.733
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.703
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.812
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.802
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.733
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.703
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.802
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.752
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.703
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.802
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.752
OS03G0120900 Oryza sativa OS03G0120900 N 0.733
OS10G0537100 Oryza sativa OS10G0537100 N 0.703
OS11G0156000 Oryza sativa OS11G0156000 N 0.802
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.842
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.792
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.713
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.871
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.891
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.733
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.703
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.792
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.723
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.743
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.802
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.812
Si010849m.g Setaria italica Si010849m.g N 0.743
Si011823m.g Setaria italica Si011823m.g N 0.723
Si020241m.g Setaria italica Si020241m.g N 0.703
Si027632m.g Setaria italica Si027632m.g N 0.802
Si036864m.g Setaria italica Si036864m.g N 0.733
Si039972m.g Setaria italica Si039972m.g N 0.713
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.842
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.792
TCM_022729 Theobroma cacao TCM_022729 N 0.869
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.747
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.723
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.818
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.808
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.772
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.733
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.772
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.743
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.772
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.822
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.822
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.710
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.822
Ca_00826 Cicer arietinum Ca_00826 N 0.792
Cla014858 Citrullus lanatus Cla014858 N 0.727
Pm028725 Prunus mume Pm028725 N 0.703
30032.m000462 Ricinus communis 30032.m000462 N 0.891
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.861
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.737
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.703
mgf018965m Mimulus guttatus mgf018965m N 0.788
mgf019085m Mimulus guttatus mgf019085m N 0.822
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.782
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.802
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.822
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.822
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.802
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.802
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.822
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.812
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.832
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.861
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.752
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.812
MDP0000229742 Malus domestica MDP0000229742 N 0.802
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.703
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.812
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.812
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.723
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.772
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.782
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.723
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.723
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.703
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.705
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.703
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.723
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.901
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.881
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.901
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.822
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.802
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.772