PGSC0003DMG400046144 (Solanum tuberosum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGSC0003DMG400046144 T125855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400096573 C2H2 ZF 71 92
PGSC0003DMT400096573 C2H2 ZF 91 117

Links

Other C2H2 ZF family TFs
Other Solanum tuberosum TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.803
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.793
WIP6 Arabidopsis thaliana AT1G13290 N 0.787
WIP2 Arabidopsis thaliana AT3G57670 N 0.803
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.763
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.774
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.772
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.758
Bo4g111000 Brassica oleracea Bo4g111000 N 0.803
Bo5g015200 Brassica oleracea Bo5g015200 N 0.787
Bo5g081360 Brassica oleracea Bo5g081360 N 0.761
Bo6g073120 Brassica oleracea Bo6g073120 N 0.803
Bo8g092070 Brassica oleracea Bo8g092070 N 0.803
Bra003295 Brassica rapa Bra003295 N 0.803
Bra007346 Brassica rapa Bra007346 N 0.802
Bra014612 Brassica rapa Bra014612 N 0.803
Bra019822 Brassica rapa Bra019822 N 0.787
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.763
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.758
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.772
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.803
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.793
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.793
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.803
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.767
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.787
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.767
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.760
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.767
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.760
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.767
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.803
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.787
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.787
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.758
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.772
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.763
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.763
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.758
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.758
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.774
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.794
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.787
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.764
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.758
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.778
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.794
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.780
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.767
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.803
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.797
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.763
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.758
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.772
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.758
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.772
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.787
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.793
OB06G28740 Oryza brachyantha OB06G28740 N 0.763
OB08G26650 Oryza brachyantha OB08G26650 N 0.758
OBART02G07320 Oryza barthii OBART02G07320 N 0.761
OBART06G20890 Oryza barthii OBART06G20890 N 0.787
OBART08G19670 Oryza barthii OBART08G19670 N 0.758
OBART09G03640 Oryza barthii OBART09G03640 N 0.774
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.763
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.758
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.774
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.772
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.758
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.758
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.774
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.772
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.758
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.774
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.763
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.772
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.758
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.758
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.763
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.758
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.774
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.772
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.758
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.761
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.763
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.758
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.758
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.774
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.763
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.774
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.772
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.758
OS06G0612300 Oryza sativa OS06G0612300 N 0.763
OS08G0504000 Oryza sativa OS08G0504000 N 0.758
OS09G0307400 Oryza sativa OS09G0307400 N 0.772
OS09G0485600 Oryza sativa OS09G0485600 N 0.758
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.764
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.797
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.803
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.774
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.788
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.774
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.793
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.803
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.803
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.793
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.797
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.772
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.758
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.763
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.787
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.787
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.787
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.787
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.793
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.793
Si006616m.g Setaria italica Si006616m.g N 0.763
Si013819m.g Setaria italica Si013819m.g N 0.758
Si030360m.g Setaria italica Si030360m.g N 0.772
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.764
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.803
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.797
TCM_005892 Theobroma cacao TCM_005892 N 0.774
TCM_011858 Theobroma cacao TCM_011858 N 0.793
TCM_024788 Theobroma cacao TCM_024788 N 0.803
TCM_040610 Theobroma cacao TCM_040610 N 0.787
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.772
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.772
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.787
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.787
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.772
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.793
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.773
NTT Vitis vinifera VIT_08s0007g08070 N 0.803
Ca_07269 Cicer arietinum Ca_07269 N 0.803
Ca_08435 Cicer arietinum Ca_08435 N 0.793
Ca_21713 Cicer arietinum Ca_21713 N 0.787
Ca_24699 Cicer arietinum Ca_24699 N 0.793
Ca_27078 Cicer arietinum Ca_27078 N 0.760
Cla002714 Citrullus lanatus Cla002714 N 0.793
Cla008187 Citrullus lanatus Cla008187 N 0.803
Cla008675 Citrullus lanatus Cla008675 N 0.797
Cla015481 Citrullus lanatus Cla015481 N 0.767
Pm000471 Prunus mume Pm000471 N 0.797
Pm025853 Prunus mume Pm025853 N 0.803
Pm029018 Prunus mume Pm029018 N 0.793
27810.m000651 Ricinus communis 27810.m000651 N 0.803
29908.m006047 Ricinus communis 29908.m006047 N 0.760
30061.m000294 Ricinus communis 30061.m000294 N 0.767
30169.m006417 Ricinus communis 30169.m006417 N 0.788
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.782
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.803
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.774
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.803
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.760
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.793
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.794
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.767
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.767
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.803
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.793
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.803
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.787
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.787
mgf019910m Mimulus guttatus mgf019910m N 0.797
mgf022319m Mimulus guttatus mgf022319m N 0.767
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.793
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.787
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.803
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.803
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.787
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.787
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.803
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.803
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.797
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.784
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.803
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.793
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.787
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.764
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.793
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.803
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.784
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.803
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.797
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.803
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.803
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.774
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.774
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.797
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.797
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.793
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.787
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.793
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.764
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.778
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.778
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.793
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.764
MDP0000142494 Malus domestica MDP0000142494 N 0.761
MDP0000144266 Malus domestica MDP0000144266 N 0.762
MDP0000303483 Malus domestica MDP0000303483 N 0.793
MDP0000403797 Malus domestica MDP0000403797 N 0.797
MDP0000580545 Malus domestica MDP0000580545 N 0.797
MDP0000601705 Malus domestica MDP0000601705 N 0.803
MDP0000899280 Malus domestica MDP0000899280 N 0.784
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.797
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.763
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.803
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.784
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.772
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.763
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.758
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.758
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.788
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.803
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.764
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.803
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.787
PK03705.1 Cannabis sativa PK03705.1 N 0.803
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.803
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.793