MTR_8g079492 (Medicago truncatula)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 MTR_8g079492 T019875_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.878 0.878
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH20525 B3 126 228
KEH20526 B3 126 228
KEH20527 B3 44 146

Links

Other B3 family TFs
Other Medicago truncatula TFs

499 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29613.m000367 Ricinus communis 29613.m000367 N
30099.m001672 Ricinus communis 30099.m001672 N
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N
AGL61 Arabidopsis thaliana AT2G24840 N
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N
AT4G36590 Arabidopsis thaliana AT4G36590 N
Bo8g099550 Brassica oleracea Bo8g099550 N
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N
Bra002480 Brassica rapa Bra002480 N
Bra007829 Brassica rapa Bra007829 N
Bra022434 Brassica rapa Bra022434 N
Bra026764 Brassica rapa Bra026764 N
Bra032057 Brassica rapa Bra032057 N
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N
Carubv10024914m.g Capsella rubella Carubv10024914m.g N
Carubv10028580m.g Capsella rubella Carubv10028580m.g N
cassava33542.m1 Manihot esculenta cassava33542.m1 N
Ca_04658 Cicer arietinum Ca_04658 N
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N
Cla006571 Citrullus lanatus Cla006571 N
Cla010744 Citrullus lanatus Cla010744 N
Cucsa.298560 Cucumis sativus Cucsa.298560 N
Cucsa.342610 Cucumis sativus Cucsa.342610 N
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N
evm.TU.supercontig_20.85 Carica papaya evm.TU.supercontig_20.85 N
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N
GLYMA17G01771 Glycine max GLYMA17G01771 N
GLYMA20G27361 Glycine max GLYMA20G27361 N
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N
Lus10012449.g Linum usitatissimum Lus10012449.g N
Lus10020511.g Linum usitatissimum Lus10020511.g N
MDP0000221590 Malus domestica MDP0000221590 N
MDP0000233925 Malus domestica MDP0000233925 N
MDP0000278770 Malus domestica MDP0000278770 N
MDP0000434703 Malus domestica MDP0000434703 I
mgf018529m Mimulus guttatus mgf018529m N
mgf024307m Mimulus guttatus mgf024307m N
MTR_1g075600 Medicago truncatula MTR_1g075600 N
MTR_1g077360 Medicago truncatula MTR_1g077360 N
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N
Pm021017 Prunus mume Pm021017 N
Pm021018 Prunus mume Pm021018 N
Pm021070 Prunus mume Pm021070 N
Pm021071 Prunus mume Pm021071 N
Pm030655 Prunus mume Pm030655 I
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N
TCM_006323 Theobroma cacao TCM_006323 N
TCM_006325 Theobroma cacao TCM_006325 N
TCM_012489 Theobroma cacao TCM_012489 N
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N