GLYMA06G19280 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA06G19280 T271367_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.759 0.849
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.759 0.849
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.670 0.763
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.670 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G19280.2 Myb 186 232
GLYMA06G19280.2 Myb 238 283

Links

Other Myb/SANT family TFs
Other Glycine max TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002292 Ricinus communis 29729.m002292 I
30170.m014115 Ricinus communis 30170.m014115 I
AT2G40350 Arabidopsis thaliana AT2G40350 I
Bo2g016490 Brassica oleracea Bo2g016490 I
Bo2g083920 Brassica oleracea Bo2g083920 I
Bo4g190040 Brassica oleracea Bo4g190040 I
Bo6g086320 Brassica oleracea Bo6g086320 I
Bo6g119660 Brassica oleracea Bo6g119660 I
Bo9g155940 Brassica oleracea Bo9g155940 I
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I
Bra002159 Brassica rapa Bra002159 I
Bra003752 Brassica rapa Bra003752 I
Bra008200 Brassica rapa Bra008200 I
Bra015840 Brassica rapa Bra015840 I
Bra017011 Brassica rapa Bra017011 I
Bra023674 Brassica rapa Bra023674 I
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I
Carubv10002425m.g Capsella rubella Carubv10002425m.g I
Carubv10020960m.g Capsella rubella Carubv10020960m.g I
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I
cassava41240.m1 Manihot esculenta cassava41240.m1 I
cassava45031.m1 Manihot esculenta cassava45031.m1 I
Ca_10770 Cicer arietinum Ca_10770 I
Ca_12446 Cicer arietinum Ca_12446 I
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I
Cla006713 Citrullus lanatus Cla006713 I
Cla012194 Citrullus lanatus Cla012194 I
Cla021113 Citrullus lanatus Cla021113 I
Cucsa.130200 Cucumis sativus Cucsa.130200 I
Cucsa.136780 Cucumis sativus Cucsa.136780 I
Cucsa.342750 Cucumis sativus Cucsa.342750 I
DREB2C Arabidopsis thaliana AT2G40340 D
DREB2D Arabidopsis thaliana AT1G75490 D
DREB2G Arabidopsis thaliana AT5G18450 D
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I
GLYMA02G42960 Glycine max GLYMA02G42960 I
GLYMA04G03070 Glycine max GLYMA04G03070 I
GLYMA06G03110 Glycine max GLYMA06G03110 I
GLYMA14G06080 Glycine max GLYMA14G06080 I
GLYMA14G07620 Glycine max GLYMA14G07620 I
GLYMA17G37350 Glycine max GLYMA17G37350 I
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I
GRMZM2G028386 Zea mays GRMZM2G028386 I
GRMZM2G156737 Zea mays GRMZM2G156737 I
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I
Lus10012226.g Linum usitatissimum Lus10012226.g I
Lus10023633.g Linum usitatissimum Lus10023633.g I
Lus10034902.g Linum usitatissimum Lus10034902.g I
MDP0000147009 Malus domestica MDP0000147009 I
MDP0000153866 Malus domestica MDP0000153866 I
MDP0000165880 Malus domestica MDP0000165880 I
MDP0000250924 Malus domestica MDP0000250924 I
MDP0000250927 Malus domestica MDP0000250927 I
MDP0000446783 Malus domestica MDP0000446783 I
MDP0000880312 Malus domestica MDP0000880312 I
mgf017629m Mimulus guttatus mgf017629m I
MTR_1g023170 Medicago truncatula MTR_1g023170 I
MTR_5g083340 Medicago truncatula MTR_5g083340 I
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I
Pavir.J37967 Panicum virgatum Pavir.J37967 I
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
PK07402.1 Cannabis sativa PK07402.1 D
PK07829.1 Cannabis sativa PK07829.1 I
Pm003634 Prunus mume Pm003634 I
Pm006274 Prunus mume Pm006274 I
Pm018989 Prunus mume Pm018989 I
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
Sb07g023575 Sorghum bicolor Sb07g023575 I
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I
Si002067m.g Setaria italica Si002067m.g I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
TCM_034132 Theobroma cacao TCM_034132 I
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I