Cucsa.372760 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.372760 T007112_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.793 0.980
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.372760.1 AP2 23 74

Links

Other AP2 family TFs
Other Cucumis sativus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01779 Aegilops tauschii F775_01779 I
F775_02345 Aegilops tauschii F775_02345 I
F775_32062 Aegilops tauschii F775_32062 I
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I
DREB2D Arabidopsis thaliana AT1G75490 D
DREB2G Arabidopsis thaliana AT5G18450 D
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I
Bo2g083920 Brassica oleracea Bo2g083920 I
Bo6g086320 Brassica oleracea Bo6g086320 I
Bo6g119660 Brassica oleracea Bo6g119660 I
Bo9g155940 Brassica oleracea Bo9g155940 I
Bra002159 Brassica rapa Bra002159 I
Bra003752 Brassica rapa Bra003752 I
Bra008200 Brassica rapa Bra008200 I
Bra015840 Brassica rapa Bra015840 I
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I
Carubv10002425m.g Capsella rubella Carubv10002425m.g I
Carubv10020960m.g Capsella rubella Carubv10020960m.g I
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I
Ca_10770 Cicer arietinum Ca_10770 I
Cla021113 Citrullus lanatus Cla021113 I
Cla022803 Citrullus lanatus Cla022803 I
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I
Cucsa.342750 Cucumis sativus Cucsa.342750 I
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I
GLYMA04G03070 Glycine max GLYMA04G03070 I
GLYMA06G03110 Glycine max GLYMA06G03110 I
GLYMA14G07620 Glycine max GLYMA14G07620 I
GLYMA17G37350 Glycine max GLYMA17G37350 I
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I
MLOC_12223 Hordeum vulgare MLOC_12223 I
MLOC_66580 Hordeum vulgare MLOC_66580 I
LPERR08G12790 Leersia perrieri LPERR08G12790 I
LPERR08G20650 Leersia perrieri LPERR08G20650 I
Lus10006127.g Linum usitatissimum Lus10006127.g I
Lus10010632.g Linum usitatissimum Lus10010632.g I
Lus10012226.g Linum usitatissimum Lus10012226.g I
Lus10024298.g Linum usitatissimum Lus10024298.g I
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I
MDP0000141335 Malus domestica MDP0000141335 I
MDP0000147009 Malus domestica MDP0000147009 I
MDP0000165880 Malus domestica MDP0000165880 I
MDP0000250924 Malus domestica MDP0000250924 I
MDP0000250927 Malus domestica MDP0000250927 I
MDP0000295902 Malus domestica MDP0000295902 I
MDP0000446783 Malus domestica MDP0000446783 I
cassava25887.m1 Manihot esculenta cassava25887.m1 I
cassava41240.m1 Manihot esculenta cassava41240.m1 I
cassava45031.m1 Manihot esculenta cassava45031.m1 I
MTR_1g023170 Medicago truncatula MTR_1g023170 I
mgf017629m Mimulus guttatus mgf017629m I
mgf024545m Mimulus guttatus mgf024545m I
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I
OB08G30790 Oryza brachyantha OB08G30790 I
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I
BGIOSGA026461 Oryza indica BGIOSGA026461 I
BGIOSGA026464 Oryza indica BGIOSGA026464 I
OMERI08G18820 Oryza meridionalis OMERI08G18820 I
ONIVA09G01190 Oryza nivara ONIVA09G01190 I
OPUNC08G21890 Oryza punctata OPUNC08G21890 I
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I
DREB2C Oryza sativa OS08G0565200 I
Pavir.J22169 Panicum virgatum Pavir.J22169 I
Pavir.J25464 Panicum virgatum Pavir.J25464 I
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
Pm003634 Prunus mume Pm003634 I
Pm006274 Prunus mume Pm006274 I
Pm018989 Prunus mume Pm018989 I
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I
29680.m001737 Ricinus communis 29680.m001737 I
30170.m014115 Ricinus communis 30170.m014115 I
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N
Si024059m.g Setaria italica Si024059m.g I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
TCM_026121 Theobroma cacao TCM_026121 I
TCM_034132 Theobroma cacao TCM_034132 I
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I
TRIUR3_17409 Triticum urartu TRIUR3_17409 I
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I