MDP0000773068 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000773068 T258775_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.778 0.778
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000773068 MADS box 11 55

Links

Other MADS box family TFs
Other Malus domestica TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13266 Aegilops tauschii F775_13266 I 0.717
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.822
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.800
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.867
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.800
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.756
AGL65 Arabidopsis thaliana AT1G18750 D 0.729
AGL94 Arabidopsis thaliana AT1G69540 N 0.778
AGL30 Arabidopsis thaliana AT2G03060 I 0.870
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.848
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.729
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.867
Bo6g109050 Brassica oleracea Bo6g109050 I 0.804
Bo7g080890 Brassica oleracea Bo7g080890 I 0.867
Bo8g068060 Brassica oleracea Bo8g068060 I 0.800
Bo8g104060 Brassica oleracea Bo8g104060 I 0.800
Bo9g072860 Brassica oleracea Bo9g072860 N 0.889
Bra017404 Brassica rapa Bra017404 I 0.848
Bra004393 Brassica rapa Bra004393 I 0.804
Bra031049 Brassica rapa Bra031049 I 0.800
Bra025685 Brassica rapa Bra025685 I 0.778
Bra024792 Brassica rapa Bra024792 I 0.867
Bra016544 Brassica rapa Bra016544 I 0.800
PK03147.1 Cannabis sativa PK03147.1 I 0.956
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.778
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.800
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.867
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.783
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.867
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.778
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.911
Ca_18082 Cicer arietinum Ca_18082 I 0.933
Ca_16376 Cicer arietinum Ca_16376 I 0.913
Cla018884 Citrullus lanatus Cla018884 I 0.778
Cla010361 Citrullus lanatus Cla010361 I 0.911
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.708
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.956
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.956
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.708
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.848
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.778
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.848
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.778
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.739
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.733
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.711
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.848
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.733
GLYMA02G12131 Glycine max GLYMA02G12131 N 0.822
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.870
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.851
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.889
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.711
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.708
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.889
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.889
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.822
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.733
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.783
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.891
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.733
MDP0000146415 Malus domestica MDP0000146415 I 1.000
MDP0000147667 Malus domestica MDP0000147667 I 1.000
MDP0000193129 Malus domestica MDP0000193129 I 0.711
MDP0000919323 Malus domestica MDP0000919323 I 1.000
MDP0000146231 Malus domestica MDP0000146231 I 0.978
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.756
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.756
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.889
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.867
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.756
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.933
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.733
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.702
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.733
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.733
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.756
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.766
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.956
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.933
AGL33 Populus trichocarpa POPTR_0018s08400 N 0.711
Pm024895 Prunus mume Pm024895 I 0.711
Pm006479 Prunus mume Pm006479 I 0.978
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.711
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.978
29813.m001508 Ricinus communis 29813.m001508 I 0.870
30138.m004061 Ricinus communis 30138.m004061 I 0.729
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.956
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.913
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.739
TCM_014051 Theobroma cacao TCM_014051 I 0.733
TCM_011687 Theobroma cacao TCM_011687 I 0.891
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.717
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.717
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.717
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.717
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.711