GE25578 (Drosophila yakuba)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 FBgn0242642 T329820_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.427 0.283
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.427 0.283
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.427 0.283
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.420 0.283
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.420 0.283
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0270588 Sox 163 208

Links

Other Sox family TFs
Other Drosophila yakuba TFs

475 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_21760 Aegilops tauschii F775_21760 I 0.000
F775_25656 Aegilops tauschii F775_25656 I 0.000
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.000
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.000
Aquca_011_00559 Aquilegia coerulea Aquca_011_00559 I 0.000
Aquca_058_00006 Aquilegia coerulea Aquca_058_00006 I 0.000
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.000
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.000
LBD25 Arabidopsis lyrata fgenesh2_kg.5__545__AT3G27650.1 I 0.000
ASL1 Arabidopsis lyrata fgenesh2_kg.8__2729__AT5G66870.1 I 0.000
LOB Arabidopsis lyrata scaffold_802995.1 I 0.000
LBD6 Arabidopsis thaliana AT1G65620 D 0.000
LBD25 Arabidopsis thaliana AT3G27650 I 0.000
LOB Arabidopsis thaliana AT5G63090 D 0.000
LBD36 Arabidopsis thaliana AT5G66870 I 0.000
Bostr.0556s0446 Boechera stricta Bostr.0556s0446 I 0.000
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I 0.000
Bostr.0568s0498 Boechera stricta Bostr.0568s0498 I 0.000
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.000
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.000
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.000
Bo2g051420 Brassica oleracea Bo2g051420 I 0.000
Bo2g144870 Brassica oleracea Bo2g144870 I 0.000
Bo2g167820 Brassica oleracea Bo2g167820 I 0.000
Bo3g104760 Brassica oleracea Bo3g104760 I 0.000
Bo7g085860 Brassica oleracea Bo7g085860 I 0.000
Bo9g008330 Brassica oleracea Bo9g008330 I 0.000
Bo9g017470 Brassica oleracea Bo9g017470 I 0.000
Bra025294 Brassica rapa Bra025294 I 0.000
Bra033019 Brassica rapa Bra033019 I 0.000
Bra035860 Brassica rapa Bra035860 I 0.000
Bra038606 Brassica rapa Bra038606 I 0.000
Bra039072 Brassica rapa Bra039072 I 0.000
Bra039733 Brassica rapa Bra039733 I 0.000
PK18922.1 Cannabis sativa PK18922.1 I 0.000
PK21510.1 Cannabis sativa PK21510.1 I 0.000
PK26472.1 Cannabis sativa PK26472.1 I 0.000
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.000
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I 0.000
Cagra.5118s0045 Capsella grandiflora Cagra.5118s0045 I 0.000
Cagra.5575s0004 Capsella grandiflora Cagra.5575s0004 I 0.000
Carubv10018238m.g Capsella rubella Carubv10018238m.g I 0.000
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.000
Carubv10026811m.g Capsella rubella Carubv10026811m.g I 0.000
Carubv10028397m.g Capsella rubella Carubv10028397m.g I 0.000
evm.TU.supercontig_108.62 Carica papaya evm.TU.supercontig_108.62 I 0.000
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.000
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.000
evm.TU.supercontig_6.423 Carica papaya evm.TU.supercontig_6.423 I 0.000
Ca_07463 Cicer arietinum Ca_07463 I 0.000
Ca_08824 Cicer arietinum Ca_08824 I 0.000
Ca_20200 Cicer arietinum Ca_20200 I 0.000
Ca_24372 Cicer arietinum Ca_24372 I 0.000
Cla003499 Citrullus lanatus Cla003499 I 0.000
Cla005851 Citrullus lanatus Cla005851 I 0.000
Cla009336 Citrullus lanatus Cla009336 I 0.000
Cla010600 Citrullus lanatus Cla010600 I 0.000
Cla017388 Citrullus lanatus Cla017388 I 0.000
Cla019510 Citrullus lanatus Cla019510 I 0.000
Cla020438 Citrullus lanatus Cla020438 I 0.000
Ciclev10017006m.g Citrus clementina Ciclev10017006m.g I 0.000
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.000
Ciclev10022371m.g Citrus clementina Ciclev10022371m.g I 0.000
Ciclev10027275m.g Citrus clementina Ciclev10027275m.g I 0.000
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.000
orange1.1g031572m.g Citrus sinensis orange1.1g031572m.g I 0.000
orange1.1g036845m.g Citrus sinensis orange1.1g036845m.g I 0.000
orange1.1g039589m.g Citrus sinensis orange1.1g039589m.g I 0.000
Cucsa.011300 Cucumis sativus Cucsa.011300 I 0.000
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.000
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.000
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.000
Cucsa.236600 Cucumis sativus Cucsa.236600 I 0.000
Cucsa.250570 Cucumis sativus Cucsa.250570 I 0.000
Cucsa.339980 Cucumis sativus Cucsa.339980 I 0.000
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.000
Eucgr.I01750 Eucalyptus grandis Eucgr.I01750 I 0.000
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.000
Eucgr.K02809 Eucalyptus grandis Eucgr.K02809 I 0.000
Thhalv10004535m.g Eutrema salsugineum Thhalv10004535m.g I 0.000
Thhalv10004979m.g Eutrema salsugineum Thhalv10004979m.g I 0.000
Thhalv10005120m.g Eutrema salsugineum Thhalv10005120m.g I 0.000
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.000
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.000
gene24088-v1.0-hybrid Fragaria vesca gene24088-v1.0-hybrid I 0.000
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.000
gene30401-v1.0-hybrid Fragaria vesca gene30401-v1.0-hybrid I 0.000
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.000
GLYMA01G39060 Glycine max GLYMA01G39060 I 0.000
GLYMA04G36080 Glycine max GLYMA04G36080 I 0.000
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.000
GLYMA05G08870 Glycine max GLYMA05G08870 I 0.000
GLYMA06G18861 Glycine max GLYMA06G18861 I 0.000
GLYMA11G06210 Glycine max GLYMA11G06210 I 0.000
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.000
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.000
GLYMA16G07770 Glycine max GLYMA16G07770 I 0.000
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.000
GLYMA19G00390 Glycine max GLYMA19G00390 I 0.000
GLYMA19G12650 Glycine max GLYMA19G12650 I 0.000
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.000
Gorai.007G075700 Gossypium raimondii Gorai.007G075700 I 0.000
Gorai.007G210500 Gossypium raimondii Gorai.007G210500 I 0.000
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.000
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I 0.000
Gorai.012G063800 Gossypium raimondii Gorai.012G063800 I 0.000
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.000
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.000
LPERR03G21590 Leersia perrieri LPERR03G21590 I 0.000
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.000
Lus10016769.g Linum usitatissimum Lus10016769.g I 0.000
Lus10022264.g Linum usitatissimum Lus10022264.g I 0.000
Lus10022463.g Linum usitatissimum Lus10022463.g I 0.000
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.000
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.000
chr1.CM0171.410.nc Lotus japonicus chr1.CM0171.410.nc I 0.000
chr2.LjT16G06.10.nd Lotus japonicus chr2.LjT16G06.10.nd I 0.000
chr2.LjT30P12.80.nc Lotus japonicus chr2.LjT30P12.80.nc I 0.000
LjSGA_042891.1 Lotus japonicus LjSGA_042891.1 I 0.000
MDP0000130659 Malus domestica MDP0000130659 I 0.000
MDP0000254288 Malus domestica MDP0000254288 I 0.000
MDP0000273432 Malus domestica MDP0000273432 I 0.000
MDP0000643326 Malus domestica MDP0000643326 I 0.000
MDP0000777060 Malus domestica MDP0000777060 I 0.000
MDP0000848210 Malus domestica MDP0000848210 I 0.000
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.000
cassava12464.valid.m1 Manihot esculenta cassava12464.valid.m1 I 0.000
cassava16846.m1 Manihot esculenta cassava16846.m1 I 0.000
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.000
cassava32690.m1 Manihot esculenta cassava32690.m1 I 0.000
cassava32691.m1 Manihot esculenta cassava32691.m1 I 0.000
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.000
cassava3724.m1 Manihot esculenta cassava3724.m1 I 0.000
MTR_3g077240 Medicago truncatula MTR_3g077240 I 0.000
MTR_4g105170 Medicago truncatula MTR_4g105170 I 0.000
MTR_6g005070 Medicago truncatula MTR_6g005070 I 0.000
MTR_6g005080 Medicago truncatula MTR_6g005080 I 0.000
MTR_7g033800 Medicago truncatula MTR_7g033800 I 0.000
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.000
mgf003146m Mimulus guttatus mgf003146m I 0.000
mgf004296m Mimulus guttatus mgf004296m I 0.000
mgf014755m Mimulus guttatus mgf014755m I 0.000
mgf016361m Mimulus guttatus mgf016361m I 0.000
mgf024603m Mimulus guttatus mgf024603m I 0.000
OBART01G04470 Oryza barthii OBART01G04470 I 0.000
OB01G14220 Oryza brachyantha OB01G14220 I 0.000
OB05G24560 Oryza brachyantha OB05G24560 I 0.000
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.000
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.000
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.000
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.000
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.000
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.000
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.000
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.000
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.000
OS01G0169400 Oryza sativa OS01G0169400 I 0.000
OS05G0417000 Oryza sativa OS05G0417000 I 0.000
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.000
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.000
gw1.170.36.1 Physcomitrella patens gw1.170.36.1 I 0.000
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I 0.000
gw1.238.28.1 Physcomitrella patens gw1.238.28.1 D 0.000
gw1.66.118.1 Physcomitrella patens gw1.66.118.1 I 0.000
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I 0.000
gw1.7.209.1 Physcomitrella patens gw1.7.209.1 I 0.000
POPTR_0001s35280 Populus trichocarpa POPTR_0001s35280 I 0.000
POPTR_0005s14150 Populus trichocarpa POPTR_0005s14150 I 0.000
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I 0.000
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.000
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.000
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.000
POPTR_0015s09370 Populus trichocarpa POPTR_0015s09370 I 0.000
Pm010483 Prunus mume Pm010483 I 0.000
Pm015649 Prunus mume Pm015649 I 0.000
Pm024312 Prunus mume Pm024312 I 0.000
Pm026450 Prunus mume Pm026450 I 0.000
PRUPE_ppa015145mg Prunus persica PRUPE_ppa015145mg I 0.000
PRUPE_ppa018381mg Prunus persica PRUPE_ppa018381mg I 0.000
PRUPE_ppa023059mg Prunus persica PRUPE_ppa023059mg I 0.000
PRUPE_ppa026393mg Prunus persica PRUPE_ppa026393mg I 0.000
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.000
29676.m001633 Ricinus communis 29676.m001633 I 0.000
29917.m001993 Ricinus communis 29917.m001993 I 0.000
29929.m004500 Ricinus communis 29929.m004500 I 0.000
30147.m013890 Ricinus communis 30147.m013890 I 0.000
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.000
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.000
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.000
SapurV1A.0428s0090 Salix purpurea SapurV1A.0428s0090 I 0.000
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I 0.000
SapurV1A.0811s0010 Salix purpurea SapurV1A.0811s0010 I 0.000
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I 0.000
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I 0.000
SapurV1A.1328s0080 Salix purpurea SapurV1A.1328s0080 I 0.000
SELMODRAFT_59324 Selaginella moellendorffii SELMODRAFT_59324 I 0.000
SELMODRAFT_68988 Selaginella moellendorffii SELMODRAFT_68988 I 0.000
Si002632m.g Setaria italica Si002632m.g I 0.000
Si036905m.g Setaria italica Si036905m.g I 0.000
Solyc02g065150.1 Solanum lycopersicum Solyc02g065150.1 I 0.000
Solyc02g067800.2 Solanum lycopersicum Solyc02g067800.2 I 0.000
Solyc02g086480.1 Solanum lycopersicum Solyc02g086480.1 I 0.000
Solyc02g090410.2 Solanum lycopersicum Solyc02g090410.2 I 0.000
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.000
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.000
Solyc06g071660.1 Solanum lycopersicum Solyc06g071660.1 I 0.000
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.000
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.000
PGSC0003DMG400006914 Solanum tuberosum PGSC0003DMG400006914 I 0.000
PGSC0003DMG400010023 Solanum tuberosum PGSC0003DMG400010023 I 0.000
PGSC0003DMG400012629 Solanum tuberosum PGSC0003DMG400012629 I 0.000
PGSC0003DMG400018112 Solanum tuberosum PGSC0003DMG400018112 I 0.000
PGSC0003DMG400027078 Solanum tuberosum PGSC0003DMG400027078 I 0.000
PGSC0003DMG402000764 Solanum tuberosum PGSC0003DMG402000764 I 0.000
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.000
TCM_000560 Theobroma cacao TCM_000560 I 0.000
TCM_012190 Theobroma cacao TCM_012190 I 0.000
TCM_016952 Theobroma cacao TCM_016952 I 0.000
TCM_024217 Theobroma cacao TCM_024217 I 0.000
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.000
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.000
Traes_4AL_C060BF9F6 Triticum aestivum Traes_4AL_C060BF9F6 I 0.000
Traes_4BS_C1F4F41E9 Triticum aestivum Traes_4BS_C1F4F41E9 I 0.000
Traes_4DS_72ABC3EE5 Triticum aestivum Traes_4DS_72ABC3EE5 I 0.000
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 0.000
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.000
AS2 Vitis vinifera VIT_00s0340g00090 I 0.000
VIT_00s1247g00010 Vitis vinifera VIT_00s1247g00010 I 0.000
VIT_07s0197g00020 Vitis vinifera VIT_07s0197g00020 I 0.000
VIT_07s0197g00040 Vitis vinifera VIT_07s0197g00040 I 0.000
LBD25 Vitis vinifera VIT_14s0066g00680 I 0.000
LOB Vitis vinifera VIT_17s0000g09010 I 0.000
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.000