SapurV1A.0766s0120 (Salix purpurea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SapurV1A.0766s0120 T334716_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.454 0.552
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0766s0120.1.p Sox 105 172
SapurV1A.0766s0120.2.p Sox 46 113

Links

Other Sox family TFs
Other Salix purpurea TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002381 Aedes aegypti AAEL002381 N 0.479
AAEL011414 Aedes aegypti AAEL011414 N 0.415
AAEL011425 Aedes aegypti AAEL011425 I 0.440
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.465
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.465
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N 0.451
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I 0.536
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I 0.435
Aquca_035_00040 Aquilegia coerulea Aquca_035_00040 I 0.479
HMGB1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001281 I 0.442
HMGB2 Arabidopsis lyrata fgenesh2_kg.1__2255__AT1G20693.2 I 0.441
HMGB3 Arabidopsis lyrata fgenesh2_kg.1__2258__AT1G20696.3 I 0.419
HMGB4 Arabidopsis lyrata fgenesh2_kg.3__3350__AT2G17560.1 I 0.433
fgenesh2_kg.6__1935__AT5G23420.1 Arabidopsis lyrata fgenesh2_kg.6__1935__AT5G23420.1 N 0.512
scaffold_602413.1 Arabidopsis lyrata scaffold_602413.1 N 0.487
HMGB2 Arabidopsis thaliana AT1G20693 I 0.441
HMGB3 Arabidopsis thaliana AT1G20696 I 0.419
HMGB4 Arabidopsis thaliana AT2G17560 I 0.433
HMGB1 Arabidopsis thaliana AT3G51880 I 0.442
HMGB7 Arabidopsis thaliana AT5G23420 N 0.487
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N 0.573
Bostr.18351s0219 Boechera stricta Bostr.18351s0219 I 0.433
Bostr.6864s0060 Boechera stricta Bostr.6864s0060 I 0.442
Bostr.7128s0662 Boechera stricta Bostr.7128s0662 I 0.419
Bostr.7128s0663 Boechera stricta Bostr.7128s0663 I 0.441
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.484
BRADI3G12920 Brachypodium distachyon BRADI3G12920 I 0.434
Bo2g160920 Brassica oleracea Bo2g160920 I 0.647
Bo7g014280 Brassica oleracea Bo7g014280 I 0.417
Bo7g061420 Brassica oleracea Bo7g061420 I 0.419
Bo7g101270 Brassica oleracea Bo7g101270 I 0.442
Bo8g070350 Brassica oleracea Bo8g070350 I 0.419
Bo8g081200 Brassica oleracea Bo8g081200 I 0.429
Bo9g014140 Brassica oleracea Bo9g014140 I 0.589
Bra002073 Brassica rapa Bra002073 I 0.437
Bra025838 Brassica rapa Bra025838 I 0.419
Bra026498 Brassica rapa Bra026498 I 0.589
Bra029371 Brassica rapa Bra029371 I 0.647
Bra037266 Brassica rapa Bra037266 I 0.420
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.455
PK03866.1 Cannabis sativa PK03866.1 I 0.602
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.600
Cagra.1043s0022 Capsella grandiflora Cagra.1043s0022 I 0.442
Cagra.1891s0017 Capsella grandiflora Cagra.1891s0017 I 0.433
Cagra.6160s0027 Capsella grandiflora Cagra.6160s0027 I 0.419
Cagra.6160s0028 Capsella grandiflora Cagra.6160s0028 I 0.441
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.600
Carubv10010586m.g Capsella rubella Carubv10010586m.g I 0.441
Carubv10012681m.g Capsella rubella Carubv10012681m.g I 0.419
Carubv10014808m.g Capsella rubella Carubv10014808m.g I 0.433
Carubv10018109m.g Capsella rubella Carubv10018109m.g I 0.429
evm.TU.supercontig_11.167 Carica papaya evm.TU.supercontig_11.167 I 0.426
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I 0.451
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N 0.613
fgeneshCV_pg.C_scaffold_4000123 Chlorella vulgaris fgeneshCV_pg.C_scaffold_4000123 N 0.468
Ca_05351 Cicer arietinum Ca_05351 I 0.523
Ca_19340 Cicer arietinum Ca_19340 I 0.441
Cla009222 Citrullus lanatus Cla009222 I 0.641
Cla018386 Citrullus lanatus Cla018386 I 0.425
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.625
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.625
fgenesh1_pg.4_#_114 Coccomyxa subellipsoidea C169 fgenesh1_pg.4_#_114 N 0.468
Chro.20230 Cryptosporidium hominis Chro.20230 N 0.449
cgd2_2120 Cryptosporidium parvum cgd2_2120 N 0.449
Cucsa.067200 Cucumis sativus Cucsa.067200 I 0.436
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.641
CpipJ_CPIJ002952 Culex pipiens CpipJ_CPIJ002952 N 0.415
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.430
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.460
CPIJ002952 Culex quinquefasciatus CPIJ002952 N 0.415
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.430
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.460
KGM_13851 Danaus plexippus KGM_13851 N 0.471
KGM_13852 Danaus plexippus KGM_13852 I 0.422
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.464
GF12460 Drosophila ananassae FBgn0089497 N 0.475
GG19998 Drosophila erecta FBgn0112197 N 0.475
GH21151 Drosophila grimshawi FBgn0128613 N 0.474
Ssrp Drosophila melanogaster FBgn0010278 N 0.475
GI18750 Drosophila mojavensis FBgn0141489 N 0.448
GL11071 Drosophila persimilis FBgn0148681 N 0.427
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.427
GD25013 Drosophila simulans FBgn0196325 N 0.475
GJ21774 Drosophila virilis FBgn0208892 N 0.475
GE11532 Drosophila yakuba FBgn0229332 N 0.475
ETH_00031100 Eimeria tenella ETH_00031100 I 0.428
Eucgr.A00506 Eucalyptus grandis Eucgr.A00506 I 0.425
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I 0.580
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I 0.419
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N 0.628
Thhalv10010751m.g Eutrema salsugineum Thhalv10010751m.g I 0.442
Thhalv10022905m.g Eutrema salsugineum Thhalv10022905m.g I 0.420
gene00778-v1.0-hybrid Fragaria vesca gene00778-v1.0-hybrid N 0.452
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.425
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.425
GLYMA10G43440 Glycine max GLYMA10G43440 I 0.543
GLYMA20G23370 Glycine max GLYMA20G23370 I 0.543
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.644
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.417
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.417
HHAL000319-PA Halyomorpha halys HHAL000319-PA N 0.433
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.455
HMEL015307 Heliconius melpomene HMEL015307 N 0.484
MLOC_77667 Hordeum vulgare MLOC_77667 I 0.461
LPERR06G23570 Leersia perrieri LPERR06G23570 I 0.421
LPERR08G00140 Leersia perrieri LPERR08G00140 N 0.507
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.488
Lus10012252.g Linum usitatissimum Lus10012252.g I 0.416
Lus10016025.g Linum usitatissimum Lus10016025.g I 0.416
Lus10028298.g Linum usitatissimum Lus10028298.g I 0.438
Lus10040192.g Linum usitatissimum Lus10040192.g I 0.436
Lus10041009.g Linum usitatissimum Lus10041009.g N 0.548
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.515
LjT35D08.150.nd Lotus japonicus LjT35D08.150.nd I 0.461
LCUP005047 Lucilia cuprina LCUP005047 N 0.434
ENSMMUP00000037751 Macaca fascicularis ENSMMUP00000037751 N 0.455
MDP0000205665 Malus domestica MDP0000205665 I 0.727
cassava1392.valid.m1 Manihot esculenta cassava1392.valid.m1 I 0.492
cassava17389.m1 Manihot esculenta cassava17389.m1 I 0.416
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.473
MTR_1g115220 Medicago truncatula MTR_1g115220 I 0.507
MTR_3g115580 Medicago truncatula MTR_3g115580 I 0.447
MTR_7g068280 Medicago truncatula MTR_7g068280 I 0.461
MTR_7g082820 Medicago truncatula MTR_7g082820 I 0.426
MCINX001064 Melitaea cinxia MCINX001064 I 0.422
mgf006113m Mimulus guttatus mgf006113m I 0.426
mgf008076m Mimulus guttatus mgf008076m I 0.426
mgf009124m Mimulus guttatus mgf009124m N 0.550
mgf009330m Mimulus guttatus mgf009330m I 0.442
mgf014518m Mimulus guttatus mgf014518m I 0.439
mgf016363m Mimulus guttatus mgf016363m I 0.432
mgf016608m Mimulus guttatus mgf016608m I 0.426
GSMUA_Achr11G07320_001 Musa acuminata GSMUA_Achr11G07320_001 I 0.435
GSMUA_Achr2G03630_001 Musa acuminata GSMUA_Achr2G03630_001 I 0.425
GSMUA_Achr9G21200_001 Musa acuminata GSMUA_Achr9G21200_001 I 0.425
GSMUA_AchrUn_randomG05290_001 Musa acuminata GSMUA_AchrUn_randomG05290_001 I 0.546
GSMUA_AchrUn_randomG22010_001 Musa acuminata GSMUA_AchrUn_randomG22010_001 I 0.435
MDOA007633 Musca domestica MDOA007633 N 0.475
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N 0.481
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.500
OBART06G28090 Oryza barthii OBART06G28090 I 0.421
OBART08G00070 Oryza barthii OBART08G00070 I 0.634
OB08G10120 Oryza brachyantha OB08G10120 N 0.615
ORGLA06G0238300 Oryza glaberrima ORGLA06G0238300 I 0.421
OGLUM06G29480 Oryza glumaepatula OGLUM06G29480 I 0.421
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.634
BGIOSGA023639 Oryza indica BGIOSGA023639 I 0.484
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.634
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.634
OLONG_007465 Oryza longistaminata OLONG_007465 I 0.421
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.634
OMERI06G28030 Oryza meridionalis OMERI06G28030 I 0.421
ONIVA06G31070 Oryza nivara ONIVA06G31070 I 0.421
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.634
OPUNC06G25640 Oryza punctata OPUNC06G25640 I 0.421
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.634
ORUFI06G30030 Oryza rufipogon ORUFI06G30030 I 0.421
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.634
OS06G0728000 Oryza sativa OS06G0728000 I 0.421
OS08G0101100 Oryza sativa OS08G0101100 I 0.634
OSTLU_15773 Ostreococcus lucimarinus OSTLU_15773 N 0.456
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.422
ENSOGAG00000034481 Otolemur garnettii ENSOGAG00000034481 N 0.435
Pavir.Db00040 Panicum virgatum Pavir.Db00040 I 0.421
Pavir.Fb00026 Panicum virgatum Pavir.Fb00026 N 0.434
Pavir.J04920 Panicum virgatum Pavir.J04920 I 0.421
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.560
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.480
PDK_20s1355261g001 Phoenix dactylifera PDK_20s1355261g001 N 0.566
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.552
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I 0.462
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I 0.453
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I 0.453
HMG-1 Pisum sativum Q41026_PEA D 0.454
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I 0.425
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.703
Pm002934 Prunus mume Pm002934 I 0.425
Pm006054 Prunus mume Pm006054 I 0.724
Pm026798 Prunus mume Pm026798 I 0.419
PRUPE_ppa007518mg Prunus persica PRUPE_ppa007518mg I 0.425
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.419
PRUPE_ppa012972mg Prunus persica PRUPE_ppa012972mg I 0.419
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.724
29600.m000548 Ricinus communis 29600.m000548 I 0.423
30131.m007272 Ricinus communis 30131.m007272 I 0.601
SapurV1A.0016s0600 Salix purpurea SapurV1A.0016s0600 I 0.419
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I 0.430
SPRG_10438 Saprolegnia parasitica SPRG_10438 N 0.421
SELMODRAFT_175895 Selaginella moellendorffii SELMODRAFT_175895 I 0.422
SELMODRAFT_38818 Selaginella moellendorffii SELMODRAFT_38818 I 0.422
Si007288m.g Setaria italica Si007288m.g I 0.421
Si011290m.g Setaria italica Si011290m.g N 0.415
Si014434m.g Setaria italica Si014434m.g N 0.595
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.541
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.425
PGSC0003DMG400018685 Solanum tuberosum PGSC0003DMG400018685 I 0.432
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.593
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.563
TCM_007659 Theobroma cacao TCM_007659 I 0.654
TCM_042534 Theobroma cacao TCM_042534 I 0.444
TC012866 Tribolium castaneum TC012866 N 0.451
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I 0.464
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I 0.464
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I 0.464
TRIUR3_35367 Triticum urartu TRIUR3_35367 I 0.464
HMGB1 Vitis vinifera VIT_08s0007g02200 I 0.425
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.647
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.586
GRMZM2G162284 Zea mays GRMZM2G162284 I 0.418
L798_13679 Zootermopsis nevadensis L798_13679 N 0.459