TRE_0001071501 (Trichobilharzia regenti)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 TRE_0001071501 T337210_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001071501-mRNA-1 Sox 2 30
TRE_0001071501-mRNA-1 Sox 50 116

Links

Other Sox family TFs
Other Trichobilharzia regenti TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I
Aquca_013_00580 Aquilegia coerulea Aquca_013_00580 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
Al_scaffold_0004_3226 Arabidopsis lyrata Al_scaffold_0004_3226 I
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I
LBD31 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002970 N
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I
LBD19 Arabidopsis thaliana AT2G45410 D
LBD18 Arabidopsis thaliana AT2G45420 D
LBD20 Arabidopsis thaliana AT3G03760 I
LBD31 Arabidopsis thaliana AT4G00210 I
Bostr.14547s0030 Boechera stricta Bostr.14547s0030 I
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I
Bostr.25993s0234 Boechera stricta Bostr.25993s0234 I
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I
Bo1g153580 Brassica oleracea Bo1g153580 I
Bo4g024610 Brassica oleracea Bo4g024610 I
Bo4g024620 Brassica oleracea Bo4g024620 I
Bo4g195510 Brassica oleracea Bo4g195510 I
Bo4g195520 Brassica oleracea Bo4g195520 I
Bo9g002150 Brassica oleracea Bo9g002150 I
Bra004908 Brassica rapa Bra004908 I
Bra004910 Brassica rapa Bra004910 I
Bra036436 Brassica rapa Bra036436 I
Bra040311 Brassica rapa Bra040311 I
Bra040312 Brassica rapa Bra040312 I
PK25573.1 Cannabis sativa PK25573.1 I
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I
Cagra.0698s0022 Capsella grandiflora Cagra.0698s0022 I
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I
Cagra.1261s0014 Capsella grandiflora Cagra.1261s0014 I
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I
Carubv10001875m.g Capsella rubella Carubv10001875m.g I
Carubv10002489m.g Capsella rubella Carubv10002489m.g I
Carubv10015417m.g Capsella rubella Carubv10015417m.g I
Carubv10025050m.g Capsella rubella Carubv10025050m.g I
Carubv10025477m.g Capsella rubella Carubv10025477m.g I
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I
Ca_12213 Cicer arietinum Ca_12213 I
Ca_19598 Cicer arietinum Ca_19598 I
Ca_20428 Cicer arietinum Ca_20428 I
Ca_20429 Cicer arietinum Ca_20429 I
Cla002965 Citrullus lanatus Cla002965 I
Cla006088 Citrullus lanatus Cla006088 I
Cla007068 Citrullus lanatus Cla007068 I
Cla007069 Citrullus lanatus Cla007069 I
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
orange1.1g041368m.g Citrus sinensis orange1.1g041368m.g I
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I
Cucsa.053440 Cucumis sativus Cucsa.053440 I
Cucsa.338130 Cucumis sativus Cucsa.338130 I
Cucsa.362840 Cucumis sativus Cucsa.362840 I
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I
Eucgr.E01415 Eucalyptus grandis Eucgr.E01415 I
Thhalv10001778m.g Eutrema salsugineum Thhalv10001778m.g I
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I
GLYMA01G34523 Glycine max GLYMA01G34523 I
GLYMA01G34540 Glycine max GLYMA01G34540 I
GLYMA02G27230 Glycine max GLYMA02G27230 I
GLYMA03G02620 Glycine max GLYMA03G02620 I
GLYMA03G02631 Glycine max GLYMA03G02631 I
GLYMA03G31830 Glycine max GLYMA03G31830 I
GLYMA09G40500 Glycine max GLYMA09G40500 I
GLYMA10G04040 Glycine max GLYMA10G04040 I
GLYMA13G18191 Glycine max GLYMA13G18191 I
GLYMA18G45320 Glycine max GLYMA18G45320 I
GLYMA19G30200 Glycine max GLYMA19G30200 I
GLYMA19G34590 Glycine max GLYMA19G34590 I
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I
Gorai.007G091600 Gossypium raimondii Gorai.007G091600 I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I
Gorai.008G114300 Gossypium raimondii Gorai.008G114300 I
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I
MLOC_10784 Hordeum vulgare MLOC_10784 I
MLOC_52276 Hordeum vulgare MLOC_52276 I
MLOC_55239 Hordeum vulgare MLOC_55239 I
MLOC_61947 Hordeum vulgare MLOC_61947 I
LPERR03G03470 Leersia perrieri LPERR03G03470 I
LPERR03G09330 Leersia perrieri LPERR03G09330 I
Lus10000707.g Linum usitatissimum Lus10000707.g I
Lus10009298.g Linum usitatissimum Lus10009298.g I
Lus10014757.g Linum usitatissimum Lus10014757.g I
Lus10024877.g Linum usitatissimum Lus10024877.g I
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I
MDP0000145761 Malus domestica MDP0000145761 I
MDP0000322059 Malus domestica MDP0000322059 I
MDP0000429067 Malus domestica MDP0000429067 I
cassava15337.m1 Manihot esculenta cassava15337.m1 I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
cassava25975.m1 Manihot esculenta cassava25975.m1 I
cassava28659.m1 Manihot esculenta cassava28659.m1 I
cassava28672.m1 Manihot esculenta cassava28672.m1 I
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I
cassava40137.m1 Manihot esculenta cassava40137.m1 I
MTR_7g074990 Medicago truncatula MTR_7g074990 I
MTR_7g075230 Medicago truncatula MTR_7g075230 I
MTR_7g096530 Medicago truncatula MTR_7g096530 I
MTR_8g036105 Medicago truncatula MTR_8g036105 I
mgf006429m Mimulus guttatus mgf006429m I
mgf020735m Mimulus guttatus mgf020735m I
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I
OBART03G03830 Oryza barthii OBART03G03830 I
OBART03G10450 Oryza barthii OBART03G10450 I
OB03G13890 Oryza brachyantha OB03G13890 I
OB03G20590 Oryza brachyantha OB03G20590 I
OB10G12360 Oryza brachyantha OB10G12360 I
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I
BGIOSGA011118 Oryza indica BGIOSGA011118 I
BGIOSGA011445 Oryza indica BGIOSGA011445 I
BGIOSGA032254 Oryza indica BGIOSGA032254 I
OLONG_001985 Oryza longistaminata OLONG_001985 I
OMERI03G09680 Oryza meridionalis OMERI03G09680 I
OMERI07G01660 Oryza meridionalis OMERI07G01660 I
ONIVA03G03580 Oryza nivara ONIVA03G03580 I
ONIVA10G03250 Oryza nivara ONIVA10G03250 I
OPUNC03G03520 Oryza punctata OPUNC03G03520 I
OPUNC03G10080 Oryza punctata OPUNC03G10080 I
OPUNC10G02630 Oryza punctata OPUNC10G02630 I
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I
OS03G0149100 Oryza sativa OS03G0149100 I
OS03G0246900 Oryza sativa OS03G0246900 I
OS10G0162600 Oryza sativa OS10G0162600 I
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I
Pavir.J34872 Panicum virgatum Pavir.J34872 I
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I
POPTR_0002s14980 Populus trichocarpa POPTR_0002s14980 I
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I
Pm017935 Prunus mume Pm017935 I
Pm017936 Prunus mume Pm017936 I
Pm020629 Prunus mume Pm020629 I
Pm028642 Prunus mume Pm028642 I
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I
PRUPE_ppa017589mg Prunus persica PRUPE_ppa017589mg I
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I
30072.m000955 Ricinus communis 30072.m000955 I
30174.m008897 Ricinus communis 30174.m008897 I
30174.m008898 Ricinus communis 30174.m008898 I
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
SapurV1A.0532s0200 Salix purpurea SapurV1A.0532s0200 I
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I
Si040019m.g Setaria italica Si040019m.g I
Solyc01g091400.2 Solanum lycopersicum Solyc01g091400.2 I
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I
PGSC0003DMG400012757 Solanum tuberosum PGSC0003DMG400012757 I
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I
Sb01g041130 Sorghum bicolor Sb01g041130 I
Sb01g046990 Sorghum bicolor Sb01g046990 I
TCM_004106 Theobroma cacao TCM_004106 I
TCM_005496 Theobroma cacao TCM_005496 I
TCM_005497 Theobroma cacao TCM_005497 I
TCM_025849 Theobroma cacao TCM_025849 I
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I
LBD20 Vitis vinifera VIT_08s0056g01650 I
LBD30 Vitis vinifera VIT_15s0048g00830 I
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I
AC149818.2_FG009 Zea mays AC149818.2_FG009 I
GRMZM2G092542 Zea mays GRMZM2G092542 I
GRMZM2G110913 Zea mays GRMZM2G110913 I
GRMZM2G150594 Zea mays GRMZM2G150594 I