MDP0000141335 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000141335 T008971_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.768 0.939
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.768 0.939
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.768 0.939
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.721 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.684 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000141335 AP2 46 97

Links

Other AP2 family TFs
Other Malus domestica TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29680.m001737 Ricinus communis 29680.m001737 I 0.705
29729.m002292 Ricinus communis 29729.m002292 I 0.679
30170.m014115 Ricinus communis 30170.m014115 I 0.771
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.677
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.697
DREB2D Arabidopsis thaliana AT1G75490 D 0.768
DREB2G Arabidopsis thaliana AT5G18450 D 0.721
Bo2g016490 Brassica oleracea Bo2g016490 I 0.701
Bo2g083920 Brassica oleracea Bo2g083920 I 0.773
Bo3g013160 Brassica oleracea Bo3g013160 I 0.678
Bo6g086320 Brassica oleracea Bo6g086320 I 0.754
Bo6g119660 Brassica oleracea Bo6g119660 I 0.768
Bo9g155940 Brassica oleracea Bo9g155940 I 0.721
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.721
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.768
Bra002159 Brassica rapa Bra002159 I 0.721
Bra003752 Brassica rapa Bra003752 I 0.754
Bra006460 Brassica rapa Bra006460 I 0.678
Bra008200 Brassica rapa Bra008200 I 0.773
Bra015840 Brassica rapa Bra015840 I 0.768
Bra023674 Brassica rapa Bra023674 I 0.701
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.716
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.768
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.716
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.768
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.690
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.708
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.771
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.770
Ca_10770 Cicer arietinum Ca_10770 I 0.766
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.733
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.771
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.698
Cla006713 Citrullus lanatus Cla006713 I 0.692
Cla021113 Citrullus lanatus Cla021113 I 0.776
Cla022803 Citrullus lanatus Cla022803 I 0.732
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.693
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.732
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.779
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.681
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.723
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.700
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.682
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.717
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.774
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.700
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.768
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.779
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.748
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.766
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.766
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.772
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.772
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.777
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.726
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.777
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.758
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.682
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.682
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.680
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.694
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.700
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.688
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.715
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.677
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.706
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.766
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.741
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.728
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.697
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.741
MDP0000223609 Malus domestica MDP0000223609 I 0.692
MDP0000250924 Malus domestica MDP0000250924 I 0.775
MDP0000250927 Malus domestica MDP0000250927 I 0.749
MDP0000295902 Malus domestica MDP0000295902 I 0.802
mgf017629m Mimulus guttatus mgf017629m I 0.719
mgf024545m Mimulus guttatus mgf024545m I 0.764
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.766
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.712
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.692
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.771
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.677
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.691
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.707
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.729
PK07402.1 Cannabis sativa PK07402.1 D 0.684
Pm003634 Prunus mume Pm003634 I 0.732
Pm006274 Prunus mume Pm006274 I 0.779
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.770
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.767
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.691
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.688
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.771
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.738
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.760
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.685
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.698
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.685
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.698
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.681
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.721
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.681
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.695
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.695
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.681
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.729
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.691
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.707
TCM_026121 Theobroma cacao TCM_026121 I 0.691
TCM_034132 Theobroma cacao TCM_034132 I 0.766
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.721
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.768
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.678
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.691
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.767