Pm030655 (Prunus mume)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pm030655 T257096_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm030655 MADS box 10 57

Links

Other MADS box family TFs
Other Prunus mume TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29693.m002039 Ricinus communis 29693.m002039 I 0.875
30099.m001672 Ricinus communis 30099.m001672 N 0.708
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.708
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.771
AGL61 Arabidopsis thaliana AT2G24840 N 0.771
AGL29 Arabidopsis thaliana AT2G34440 I 0.792
AGL91 Arabidopsis thaliana AT3G66656 D 0.708
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.729
Bo1g112460 Brassica oleracea Bo1g112460 N 0.708
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
Bo4g182590 Brassica oleracea Bo4g182590 I 0.771
Bo5g113750 Brassica oleracea Bo5g113750 N 0.729
Bo8g099550 Brassica oleracea Bo8g099550 N 0.729
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.792
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.729
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.750
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.750
Bra007829 Brassica rapa Bra007829 N 0.729
Bra021910 Brassica rapa Bra021910 I 0.771
Bra032057 Brassica rapa Bra032057 N 0.729
Bra038225 Brassica rapa Bra038225 N 0.708
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.771
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.729
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.792
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.771
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.792
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.729
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.792
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
Ca_05023 Cicer arietinum Ca_05023 I 0.771
Ca_24185 Cicer arietinum Ca_24185 I 0.708
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.708
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.708
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.854
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Cla019897 Citrullus lanatus Cla019897 N 0.812
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.792
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.833
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.792
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.812
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.854
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.729
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.708
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.812
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.792
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.729
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.729
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.708
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.729
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.708
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.729
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.812
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
Lus10011787.g Linum usitatissimum Lus10011787.g N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.812
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.833
MDP0000120467 Malus domestica MDP0000120467 N 0.833
MDP0000221590 Malus domestica MDP0000221590 N 0.708
MDP0000274606 Malus domestica MDP0000274606 N 0.896
MDP0000434703 Malus domestica MDP0000434703 I 0.708
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.729
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.729
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.708
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.729
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.729
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.771
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.750
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.854
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.875
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.979
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.854
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.854
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.729
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.729
TCM_006325 Theobroma cacao TCM_006325 N 0.750
TCM_029518 Theobroma cacao TCM_029518 I 0.896
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.750
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.750
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.771
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.729
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.708
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.708