RSKR_0001171300 (Rhabditophanes kr3021)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 RSKR_0001171300 T310147_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.829 0.543
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.818 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0001171300.1 Nuclear receptor 13 82

Links

Other Nuclear receptor family TFs
Other Rhabditophanes kr3021 TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.828
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.807
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I 0.788
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.829
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.894
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.820
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.823
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.823
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I 0.788
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.773
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.829
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.865
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.865
ASU_00971 Ascaris suum ASU_00971 I 0.769
ASU_02770 Ascaris suum ASU_02770 I 0.810
ASU_03657 Ascaris suum ASU_03657 I 0.865
ASU_03870 Ascaris suum ASU_03870 I 0.818
ASU_10584 Ascaris suum ASU_10584 I 0.866
ASU_12501 Ascaris suum ASU_12501 I 0.820
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.790
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.921
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.921
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.769
Bm4980 Brugia malayi Bm4980 I 0.820
Bm5319 Brugia malayi Bm5319 I 0.816
Bm5520 Brugia malayi Bm5520 I 0.773
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.820
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.835
BTMF_0001127801 Brugia timori BTMF_0001127801 I 0.773
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.816
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.863
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.820
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.832
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.818
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.799
CBG01866 Caenorhabditis briggsae CBG01866 I 0.829
CBG02077 Caenorhabditis briggsae CBG02077 I 0.790
CBG03844 Caenorhabditis briggsae CBG03844 I 0.818
CBG09380 Caenorhabditis briggsae CBG09380 I 0.915
CBG10855 Caenorhabditis briggsae CBG10855 I 0.832
CBG10857 Caenorhabditis briggsae CBG10857 I 0.792
CBG16594 Caenorhabditis briggsae CBG16594 I 0.811
CBN15481 Caenorhabditis brenneri CBN15481 I 0.886
CBN18198 Caenorhabditis brenneri CBN18198 I 0.818
CBN19235 Caenorhabditis brenneri CBN19235 I 0.829
CBN20518 Caenorhabditis brenneri CBN20518 I 0.811
CBN20749 Caenorhabditis brenneri CBN20749 I 0.818
CBN21115 Caenorhabditis brenneri CBN21115 I 0.788
CBN24827 Caenorhabditis brenneri CBN24827 I 0.844
CBN28528 Caenorhabditis brenneri CBN28528 I 0.886
CJA00680 Caenorhabditis japonica CJA00680 I 0.792
CJA08896 Caenorhabditis japonica CJA08896 I 0.832
CJA13458 Caenorhabditis japonica CJA13458 I 0.829
CJA14248 Caenorhabditis japonica CJA14248 I 0.766
CRE00149 Caenorhabditis remanei CRE00149 I 0.832
CRE00606 Caenorhabditis remanei CRE00606 I 0.792
CRE03310 Caenorhabditis remanei CRE03310 I 0.829
CRE07549 Caenorhabditis remanei CRE07549 I 0.790
CRE08259 Caenorhabditis remanei CRE08259 I 0.818
CRE25378 Caenorhabditis remanei CRE25378 I 0.814
CRE26981 Caenorhabditis remanei CRE26981 I 0.751
CRE30787 Caenorhabditis remanei CRE30787 I 0.886
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.828
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.870
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.829
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I 0.790
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.798
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.816
DME_0001010101 Dracunculus medinensis DME_0001010101 I 0.773
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I 0.773
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.833
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.824
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.810
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.769
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.847
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.784
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.855
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.818
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.823
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.828
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.883
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.854
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.829
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.883
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.777
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.829
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.894
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.823
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.852
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.811
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.821
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.819
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.761
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.866
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.823
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.821
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.762
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.803
L889_g11570 Steinernema feltiae L889_g11570 I 0.822
L889_g1557 Steinernema feltiae L889_g1557 I 0.841
L889_g17247 Steinernema feltiae L889_g17247 I 0.811
L889_g1891 Steinernema feltiae L889_g1891 I 0.789
L889_g22425 Steinernema feltiae L889_g22425 N 0.751
L889_g22901 Steinernema feltiae L889_g22901 I 0.866
L889_g29879 Steinernema feltiae L889_g29879 I 0.819
L889_g31970 Steinernema feltiae L889_g31970 I 0.762
L889_g7780 Steinernema feltiae L889_g7780 I 0.821
L892_g17612 Steinernema scapterisci L892_g17612 I 0.835
L892_g2422 Steinernema scapterisci L892_g2422 I 0.761
L892_g4134 Steinernema scapterisci L892_g4134 I 0.821
L892_g4169 Steinernema scapterisci L892_g4169 I 0.836
L892_g5079 Steinernema scapterisci L892_g5079 I 0.866
L892_g8671 Steinernema scapterisci L892_g8671 I 0.821
L893_g13285 Steinernema glaseri L893_g13285 I 0.813
L893_g15276 Steinernema glaseri L893_g15276 I 0.866
L893_g21283 Steinernema glaseri L893_g21283 I 0.822
L893_g25227 Steinernema glaseri L893_g25227 I 0.821
L893_g263 Steinernema glaseri L893_g263 I 0.762
L893_g28857 Steinernema glaseri L893_g28857 I 0.834
L893_g3010 Steinernema glaseri L893_g3010 I 0.819
L893_g3565 Steinernema glaseri L893_g3565 I 0.836
L898_g11608 Steinernema monticolum L898_g11608 I 0.762
L898_g22454 Steinernema monticolum L898_g22454 I 0.836
L898_g23058 Steinernema monticolum L898_g23058 I 0.822
L898_g26357 Steinernema monticolum L898_g26357 I 0.811
L898_g2764 Steinernema monticolum L898_g2764 I 0.819
L898_g30390 Steinernema monticolum L898_g30390 I 0.753
L898_g8573 Steinernema monticolum L898_g8573 I 0.866
L898_g9866 Steinernema monticolum L898_g9866 I 0.842
LOAG_00300 Loa loa LOAG_00300 I 0.816
LOAG_03407 Loa loa LOAG_03407 I 0.773
LOAG_08615 Loa loa LOAG_08615 I 0.816
LOAG_16377 Loa loa LOAG_16377 I 0.835
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.846
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.906
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.766
Minc13747 Meloidogyne incognita Minc13747 I 0.766
Minc17538 Meloidogyne incognita Minc17538 I 0.766
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I 0.773
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.881
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.816
NECAME_00872 Necator americanus NECAME_00872 I 0.820
NECAME_06702 Necator americanus NECAME_06702 I 0.748
NECAME_08394 Necator americanus NECAME_08394 I 0.830
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.816
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.816
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I 0.773
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.816
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.818
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.865
PPA06637 Pristionchus pacificus PPA06637 I 0.752
PPA21777 Pristionchus pacificus PPA21777 I 0.823
PPA24468 Pristionchus pacificus PPA24468 I 0.770
PPA27011 Pristionchus pacificus PPA27011 N 0.806
PPA29597 Pristionchus pacificus PPA29597 I 0.753
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.932
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.816
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.811
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.834
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.829
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.776
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.835
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.854
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.775
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.770
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.858
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.838
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.824
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.754
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.818
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.775
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.871
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.810
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.822
SMUV_0000795201 Syphacia muris SMUV_0000795201 I 0.777
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.811
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.935
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.819
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.811
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.776
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.776
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.827
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.834
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.816
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.834
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.811
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.937
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.824
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.827
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.776
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.854
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.816
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.816
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.804
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.834
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.827
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.776
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.937
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.811
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.819
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.816
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.826
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.755
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.759
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I 0.788
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.829
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.830
nhr-40 Caenorhabditis elegans WBGene00003630 I 0.772
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.875
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.818
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.832
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.792
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.816
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.830
WBGene00240723 Onchocerca volvulus WBGene00240723 I 0.773
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.803
WUBG_08038 Wuchereria bancrofti WUBG_08038 I 0.773