Si001941m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si001941m.g T279685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.889 0.894
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.888 0.915
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.888 0.915
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.888 0.915
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.850 0.894
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.849 0.894
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.842 0.872
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.840 0.872
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.831 0.872
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.829 0.851
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.829 0.851
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.829 0.851
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.813 0.809
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.813 0.809
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.788 0.809
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.788 0.809
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.782 0.830
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.720 0.681
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.720 0.681
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.710 0.787
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.710 0.787
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.710 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si001941m Myb 108 155

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

594 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD6 Arabidopsis thaliana AT1G65620 D 0.000
LOB Arabidopsis thaliana AT5G63090 D 0.000
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.000
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.000
LBD25 Arabidopsis thaliana AT3G27650 I 0.000
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.000
Bo2g051420 Brassica oleracea Bo2g051420 I 0.000
Bo2g144870 Brassica oleracea Bo2g144870 I 0.000
Bo2g167820 Brassica oleracea Bo2g167820 I 0.000
Bo3g104760 Brassica oleracea Bo3g104760 I 0.000
Bo7g085860 Brassica oleracea Bo7g085860 I 0.000
Bo9g008330 Brassica oleracea Bo9g008330 I 0.000
Bo9g017470 Brassica oleracea Bo9g017470 I 0.000
Bra025294 Brassica rapa Bra025294 I 0.000
Bra033019 Brassica rapa Bra033019 I 0.000
Bra035860 Brassica rapa Bra035860 I 0.000
Bra038606 Brassica rapa Bra038606 I 0.000
Bra039072 Brassica rapa Bra039072 I 0.000
Bra039733 Brassica rapa Bra039733 I 0.000
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.000
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.000
F775_21760 Aegilops tauschii F775_21760 I 0.000
F775_25656 Aegilops tauschii F775_25656 I 0.000
F775_33210 Aegilops tauschii F775_33210 I 0.000
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.000
LBD25 Arabidopsis lyrata fgenesh2_kg.5__545__AT3G27650.1 I 0.000
GLYMA04G36080 Glycine max GLYMA04G36080 I 0.000
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.000
GLYMA05G08870 Glycine max GLYMA05G08870 I 0.000
GLYMA06G18861 Glycine max GLYMA06G18861 I 0.000
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.000
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.000
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.000
GLYMA16G07770 Glycine max GLYMA16G07770 I 0.000
GLYMA16G09720 Glycine max GLYMA16G09720 I 0.000
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.000
GLYMA19G00390 Glycine max GLYMA19G00390 I 0.000
GLYMA19G12650 Glycine max GLYMA19G12650 I 0.000
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.000
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.000
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.000
MTR_3g073690 Medicago truncatula MTR_3g073690 I 0.000
MTR_3g077240 Medicago truncatula MTR_3g077240 I 0.000
MTR_4g105170 Medicago truncatula MTR_4g105170 I 0.000
MTR_6g005070 Medicago truncatula MTR_6g005070 I 0.000
MTR_6g005080 Medicago truncatula MTR_6g005080 I 0.000
MTR_7g033800 Medicago truncatula MTR_7g033800 I 0.000
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.000
OB01G14220 Oryza brachyantha OB01G14220 I 0.000
OB05G24560 Oryza brachyantha OB05G24560 I 0.000
OBART01G04470 Oryza barthii OBART01G04470 I 0.000
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.000
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.000
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.000
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.000
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.000
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.000
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.000
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.000
OS01G0169400 Oryza sativa OS01G0169400 I 0.000
OS05G0417000 Oryza sativa OS05G0417000 I 0.000
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.000
PGSC0003DMG400006914 Solanum tuberosum PGSC0003DMG400006914 I 0.000
PGSC0003DMG400012629 Solanum tuberosum PGSC0003DMG400012629 I 0.000
PGSC0003DMG400018112 Solanum tuberosum PGSC0003DMG400018112 I 0.000
PGSC0003DMG400027078 Solanum tuberosum PGSC0003DMG400027078 I 0.000
POPTR_0001s35280 Populus trichocarpa POPTR_0001s35280 I 0.000
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I 0.000
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.000
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.000
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.000
POPTR_0015s09370 Populus trichocarpa POPTR_0015s09370 I 0.000
PRUPE_ppa018381mg Prunus persica PRUPE_ppa018381mg I 0.000
PRUPE_ppa023059mg Prunus persica PRUPE_ppa023059mg I 0.000
PRUPE_ppa026393mg Prunus persica PRUPE_ppa026393mg I 0.000
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.000
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.000
Sb01g014650 Sorghum bicolor Sb01g014650 I 0.000
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.000
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.000
LOB Arabidopsis lyrata scaffold_802995.1 I 0.000
SELMODRAFT_59324 Selaginella moellendorffii SELMODRAFT_59324 I 0.000
SELMODRAFT_68988 Selaginella moellendorffii SELMODRAFT_68988 I 0.000
Si002599m.g Setaria italica Si002599m.g I 0.000
Si002632m.g Setaria italica Si002632m.g I 0.000
Si036905m.g Setaria italica Si036905m.g I 0.000
Solyc02g067800.2 Solanum lycopersicum Solyc02g067800.2 I 0.000
Solyc02g086480.1 Solanum lycopersicum Solyc02g086480.1 I 0.000
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.000
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.000
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.000
Solyc06g071660.1 Solanum lycopersicum Solyc06g071660.1 I 0.000
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.000
TCM_000560 Theobroma cacao TCM_000560 I 0.000
TCM_012190 Theobroma cacao TCM_012190 I 0.000
TCM_016952 Theobroma cacao TCM_016952 I 0.000
TCM_024217 Theobroma cacao TCM_024217 I 0.000
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.000
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.000
Traes_4AL_C060BF9F6 Triticum aestivum Traes_4AL_C060BF9F6 I 0.000
Traes_4BS_C1F4F41E9 Triticum aestivum Traes_4BS_C1F4F41E9 I 0.000
Traes_4DS_72ABC3EE5 Triticum aestivum Traes_4DS_72ABC3EE5 I 0.000
TRIUR3_10339 Triticum urartu TRIUR3_10339 I 0.000
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.000
AS2 Vitis vinifera VIT_00s0340g00090 I 0.000
VIT_00s1247g00010 Vitis vinifera VIT_00s1247g00010 I 0.000
VIT_07s0197g00020 Vitis vinifera VIT_07s0197g00020 I 0.000
LBD25 Vitis vinifera VIT_14s0066g00680 I 0.000
VIT_16s0022g02050 Vitis vinifera VIT_16s0022g02050 I 0.000
LOB Vitis vinifera VIT_17s0000g09010 I 0.000
Ca_07463 Cicer arietinum Ca_07463 I 0.000
Ca_08824 Cicer arietinum Ca_08824 I 0.000
Ca_11161 Cicer arietinum Ca_11161 I 0.000
Ca_20200 Cicer arietinum Ca_20200 I 0.000
Ca_24372 Cicer arietinum Ca_24372 I 0.000
Cla003499 Citrullus lanatus Cla003499 I 0.000
Cla005851 Citrullus lanatus Cla005851 I 0.000
Cla010600 Citrullus lanatus Cla010600 I 0.000
Cla017388 Citrullus lanatus Cla017388 I 0.000
Cla019510 Citrullus lanatus Cla019510 I 0.000
Pm015649 Prunus mume Pm015649 I 0.000
Pm024312 Prunus mume Pm024312 I 0.000
Pm026450 Prunus mume Pm026450 I 0.000
29676.m001633 Ricinus communis 29676.m001633 I 0.000
29917.m001993 Ricinus communis 29917.m001993 I 0.000
29929.m004500 Ricinus communis 29929.m004500 I 0.000
30147.m013890 Ricinus communis 30147.m013890 I 0.000
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.000
cassava12464.valid.m1 Manihot esculenta cassava12464.valid.m1 I 0.000
cassava16846.m1 Manihot esculenta cassava16846.m1 I 0.000
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.000
cassava32690.m1 Manihot esculenta cassava32690.m1 I 0.000
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.000
cassava3724.m1 Manihot esculenta cassava3724.m1 I 0.000
Cucsa.011300 Cucumis sativus Cucsa.011300 I 0.000
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.000
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.000
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.000
Cucsa.250570 Cucumis sativus Cucsa.250570 I 0.000
Cucsa.339980 Cucumis sativus Cucsa.339980 I 0.000
gw1.12.172.1 Physcomitrella patens gw1.12.172.1 I 0.000
gw1.170.36.1 Physcomitrella patens gw1.170.36.1 I 0.000
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I 0.000
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I 0.000
mgf003146m Mimulus guttatus mgf003146m I 0.000
mgf014755m Mimulus guttatus mgf014755m I 0.000
mgf016361m Mimulus guttatus mgf016361m I 0.000
mgf024603m Mimulus guttatus mgf024603m I 0.000
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.000
Aquca_011_00559 Aquilegia coerulea Aquca_011_00559 I 0.000
Aquca_058_00006 Aquilegia coerulea Aquca_058_00006 I 0.000
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.000
Bostr.0556s0446 Boechera stricta Bostr.0556s0446 I 0.000
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I 0.000
Bostr.0568s0498 Boechera stricta Bostr.0568s0498 I 0.000
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.000
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.000
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I 0.000
Cagra.5118s0045 Capsella grandiflora Cagra.5118s0045 I 0.000
Cagra.5575s0004 Capsella grandiflora Cagra.5575s0004 I 0.000
Carubv10018238m.g Capsella rubella Carubv10018238m.g I 0.000
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.000
Carubv10026811m.g Capsella rubella Carubv10026811m.g I 0.000
Carubv10028397m.g Capsella rubella Carubv10028397m.g I 0.000
Ciclev10017006m.g Citrus clementina Ciclev10017006m.g I 0.000
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.000
Ciclev10022371m.g Citrus clementina Ciclev10022371m.g I 0.000
Ciclev10027275m.g Citrus clementina Ciclev10027275m.g I 0.000
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.000
Eucgr.I01750 Eucalyptus grandis Eucgr.I01750 I 0.000
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.000
Eucgr.K02809 Eucalyptus grandis Eucgr.K02809 I 0.000
evm.TU.supercontig_108.62 Carica papaya evm.TU.supercontig_108.62 I 0.000
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.000
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.000
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.000
gene24088-v1.0-hybrid Fragaria vesca gene24088-v1.0-hybrid I 0.000
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.000
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.000
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.000
Gorai.007G075700 Gossypium raimondii Gorai.007G075700 I 0.000
Gorai.007G210500 Gossypium raimondii Gorai.007G210500 I 0.000
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.000
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I 0.000
Gorai.012G063800 Gossypium raimondii Gorai.012G063800 I 0.000
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.000
Lus10016769.g Linum usitatissimum Lus10016769.g I 0.000
Lus10022264.g Linum usitatissimum Lus10022264.g I 0.000
Lus10022463.g Linum usitatissimum Lus10022463.g I 0.000
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.000
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.000
MDP0000130659 Malus domestica MDP0000130659 I 0.000
MDP0000254288 Malus domestica MDP0000254288 I 0.000
MDP0000273432 Malus domestica MDP0000273432 I 0.000
MDP0000643326 Malus domestica MDP0000643326 I 0.000
MDP0000848210 Malus domestica MDP0000848210 I 0.000
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.000
orange1.1g031572m.g Citrus sinensis orange1.1g031572m.g I 0.000
orange1.1g036845m.g Citrus sinensis orange1.1g036845m.g I 0.000
orange1.1g039589m.g Citrus sinensis orange1.1g039589m.g I 0.000
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.000
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.000
Pavir.Ib03943 Panicum virgatum Pavir.Ib03943 I 0.000
Pavir.J09541 Panicum virgatum Pavir.J09541 I 0.000
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.000
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.000
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.000
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.000
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.000
SapurV1A.0428s0090 Salix purpurea SapurV1A.0428s0090 I 0.000
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I 0.000
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I 0.000
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I 0.000
SapurV1A.1328s0080 Salix purpurea SapurV1A.1328s0080 I 0.000
Thhalv10004979m.g Eutrema salsugineum Thhalv10004979m.g I 0.000
Thhalv10005120m.g Eutrema salsugineum Thhalv10005120m.g I 0.000
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.000
PK18922.1 Cannabis sativa PK18922.1 I 0.000
PK21510.1 Cannabis sativa PK21510.1 I 0.000
PK21617.1 Cannabis sativa PK21617.1 I 0.000
PK26472.1 Cannabis sativa PK26472.1 I 0.000
PK29334.1 Cannabis sativa PK29334.1 I 0.000
chr1.CM0171.410.nc Lotus japonicus chr1.CM0171.410.nc I 0.000
chr2.LjT30P12.80.nc Lotus japonicus chr2.LjT30P12.80.nc I 0.000
LjSGA_017893.1 Lotus japonicus LjSGA_017893.1 I 0.000
LjSGA_042891.1 Lotus japonicus LjSGA_042891.1 I 0.000
GLYMA01G32340 Glycine max GLYMA01G32340 N 0.000
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.000
Pm018957 Prunus mume Pm018957 N 0.000
29814.m000742 Ricinus communis 29814.m000742 N 0.000
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.000
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.000
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.000