PGSC0003DMG400004054 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400004054 T344253_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400010380 TCP 33 196

Links

Other TCP family TFs
Other Solanum tuberosum TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.835
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.849
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.872
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.824
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.824
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.824
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.837
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.851
mgf024687m Mimulus guttatus mgf024687m I 0.863
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.844
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.823
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.895
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.849
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.865
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.833
30174.m008721 Ricinus communis 30174.m008721 I 0.857
30167.m000856 Ricinus communis 30167.m000856 I 0.826
29738.m001041 Ricinus communis 29738.m001041 I 0.830
Pm030202 Prunus mume Pm030202 I 0.891
Pm029002 Prunus mume Pm029002 I 0.859
Cla016709 Citrullus lanatus Cla016709 I 0.834
Cla002355 Citrullus lanatus Cla002355 I 0.843
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.872
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.854
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.834
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.850
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.850
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.843
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.861
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.842
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.848
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.834
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.849
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.822
MDP0000272980 Malus domestica MDP0000272980 I 0.834
MDP0000173048 Malus domestica MDP0000173048 I 0.843
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.835
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.831
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.853
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.829
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.833
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.834
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.842
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.823
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.822
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.830
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.822
OBART09G10040 Oryza barthii OBART09G10040 I 0.822
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.824
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.822
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.823
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.827
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.850
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.852
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.822
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.823
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.836
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.834
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.861
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.862
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.854
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.843
F775_01923 Aegilops tauschii F775_01923 I 0.824
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.823
BRC2 Arabidopsis thaliana AT1G68800 I 0.843
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.917
TCM_019518 Theobroma cacao TCM_019518 I 0.829
TCM_012252 Theobroma cacao TCM_012252 I 0.865
TCM_011874 Theobroma cacao TCM_011874 I 0.839
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.832
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.912
Si033183m.g Setaria italica Si033183m.g I 0.825
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.830
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.842
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.859
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.891
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.830
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.865
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.854
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.843
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.852
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.822
OS09G0410500 Oryza sativa OS09G0410500 I 0.822
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.832
MDP0000219838 Malus domestica MDP0000219838 N 0.874
MDP0000224810 Malus domestica MDP0000224810 N 0.892
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.851
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.980
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.827
Cla019282 Citrullus lanatus Cla019282 N 0.861
Cla018797 Citrullus lanatus Cla018797 N 0.825