PRUPE_ppa003211mg (Prunus persica)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 PRUPE_ppa003211mg T345753_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.947
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.947
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.947
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.947
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.880
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.827
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.693
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.680
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.680
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.667
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.667
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.667
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.653
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.640
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.627
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.627
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.627
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.627
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.613
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.613
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.613
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.600
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.600
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.587
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.587
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.560
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.560
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.560
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ06023 TCR/CxC 120 156
EMJ06023 TCR/CxC 205 242

Links

Other TCR/CxC family TFs
Other Prunus persica TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.031600 Cucumis sativus Cucsa.031600 I
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I
Carubv10020487m.g Capsella rubella Carubv10020487m.g I
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I
mgf024687m Mimulus guttatus mgf024687m I
Cucsa.280880 Cucumis sativus Cucsa.280880 I
Cucsa.238090 Cucumis sativus Cucsa.238090 I
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I
cassava9378.m1 Manihot esculenta cassava9378.m1 I
cassava32886.m1 Manihot esculenta cassava32886.m1 I
cassava16230.m1 Manihot esculenta cassava16230.m1 I
30174.m008721 Ricinus communis 30174.m008721 I
30167.m000856 Ricinus communis 30167.m000856 I
29738.m001041 Ricinus communis 29738.m001041 I
Pm030202 Prunus mume Pm030202 I
Pm029002 Prunus mume Pm029002 I
Cla016709 Citrullus lanatus Cla016709 I
Cla002355 Citrullus lanatus Cla002355 I
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I
BGIOSGA030744 Oryza indica BGIOSGA030744 I
MDP0000272980 Malus domestica MDP0000272980 I
MDP0000173048 Malus domestica MDP0000173048 I
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I
GRMZM2G166687 Zea mays GRMZM2G166687 I
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I
BRC2 Vitis vinifera VIT_01s0011g02920 I
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I
OBART09G10040 Oryza barthii OBART09G10040 I
MTR_7g018500 Medicago truncatula MTR_7g018500 I
MLOC_58142 Hordeum vulgare MLOC_58142 I
LPERR09G06870 Leersia perrieri LPERR09G06870 I
LPERR08G12880 Leersia perrieri LPERR08G12880 I
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I
ONIVA09G09540 Oryza nivara ONIVA09G09540 I
GRMZM2G110242 Zea mays GRMZM2G110242 I
GRMZM2G064628 Zea mays GRMZM2G064628 I
GRMZM2G060319 Zea mays GRMZM2G060319 I
GLYMA17G13065 Glycine max GLYMA17G13065 I
GLYMA05G07943 Glycine max GLYMA05G07943 I
GLYMA04G22407 Glycine max GLYMA04G22407 I
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I
F775_01923 Aegilops tauschii F775_01923 I
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I
BRC2 Arabidopsis thaliana AT1G68800 I
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I
TCM_019518 Theobroma cacao TCM_019518 I
TCM_012252 Theobroma cacao TCM_012252 I
TCM_011874 Theobroma cacao TCM_011874 I
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I
Si033183m.g Setaria italica Si033183m.g I
Sb07g021140 Sorghum bicolor Sb07g021140 I
Sb02g024450 Sorghum bicolor Sb02g024450 I
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I
OS09G0410500 Oryza sativa OS09G0410500 I
Cucsa.198860 Cucumis sativus Cucsa.198860 N
MDP0000219838 Malus domestica MDP0000219838 N
MDP0000224810 Malus domestica MDP0000224810 N
GLYMA06G23410 Glycine max GLYMA06G23410 N
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N
Cla019282 Citrullus lanatus Cla019282 N
Cla018797 Citrullus lanatus Cla018797 N