Eucgr.B03870 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.B03870 T142838_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B03870.1 C2H2 ZF 276 297
Eucgr.B03870.1 C2H2 ZF 296 322

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.772
29908.m006047 Ricinus communis 29908.m006047 N 0.788
30055.m001542 Ricinus communis 30055.m001542 N 0.827
30061.m000294 Ricinus communis 30061.m000294 N 0.802
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.772
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.758
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.797
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.797
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.758
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.797
BGIOSGA000452 Oryza indica BGIOSGA000452 N 0.771
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.788
Bo4g111000 Brassica oleracea Bo4g111000 N 0.772
Bo5g008880 Brassica oleracea Bo5g008880 N 0.775
Bo5g015200 Brassica oleracea Bo5g015200 N 0.758
Bo5g081360 Brassica oleracea Bo5g081360 N 0.772
Bo6g073120 Brassica oleracea Bo6g073120 N 0.772
Bo8g092070 Brassica oleracea Bo8g092070 N 0.772
Bo8g112550 Brassica oleracea Bo8g112550 N 0.775
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.758
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.758
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.772
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.779
Bra003295 Brassica rapa Bra003295 N 0.772
Bra007346 Brassica rapa Bra007346 N 0.770
Bra014612 Brassica rapa Bra014612 N 0.772
Bra018638 Brassica rapa Bra018638 N 0.775
Bra019822 Brassica rapa Bra019822 N 0.758
Bra031621 Brassica rapa Bra031621 N 0.775
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.771
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N 0.771
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.788
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.782
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.772
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.758
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.758
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.785
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.785
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.758
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.758
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.772
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.827
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.821
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.772
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.802
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.772
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.788
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.758
Ca_07051 Cicer arietinum Ca_07051 N 0.803
Ca_07269 Cicer arietinum Ca_07269 N 0.772
Ca_08435 Cicer arietinum Ca_08435 N 0.758
Ca_16482 Cicer arietinum Ca_16482 N 0.822
Ca_21713 Cicer arietinum Ca_21713 N 0.782
Ca_24699 Cicer arietinum Ca_24699 N 0.758
Ca_27078 Cicer arietinum Ca_27078 N 0.764
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.772
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.758
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.821
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.788
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.772
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.778
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.827
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.767
Cla000184 Citrullus lanatus Cla000184 N 0.808
Cla002714 Citrullus lanatus Cla002714 N 0.758
Cla008187 Citrullus lanatus Cla008187 N 0.772
Cla008675 Citrullus lanatus Cla008675 N
Cla015481 Citrullus lanatus Cla015481 N 0.778
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.778
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.784
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.808
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.772
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.758
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.772
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.758
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.772
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.758
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.774
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.782
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.768
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.788
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.827
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.758
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.772
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.788
F775_11193 Aegilops tauschii F775_11193 N 0.771
F775_14972 Aegilops tauschii F775_14972 N 0.782
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.767
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.772
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.778
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.821
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.758
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.758
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.772
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.802
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.758
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.827
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.827
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.827
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.802
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.764
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.802
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.827
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.764
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.802
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.772
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.758
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.827
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.772
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.772
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.778
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.778
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.827
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.778
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.778
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.788
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.758
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.782
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.771
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.782
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.782
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.788
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.802
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.788
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.811
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.802
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.772
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.778
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.788
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.764
LPERR01G32600 Leersia perrieri LPERR01G32600 N 0.771
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.788
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.788
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.803
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.803
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.758
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.811
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.797
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.797
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.764
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.758
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.811
MDP0000131949 Malus domestica MDP0000131949 N 0.827
MDP0000142494 Malus domestica MDP0000142494 N 0.789
MDP0000144266 Malus domestica MDP0000144266 N 0.790
MDP0000300013 Malus domestica MDP0000300013 N 0.827
MDP0000303483 Malus domestica MDP0000303483 N 0.758
MDP0000403797 Malus domestica MDP0000403797 N 0.778
MDP0000573922 Malus domestica MDP0000573922 N 0.786
MDP0000580545 Malus domestica MDP0000580545 N 0.778
MDP0000601705 Malus domestica MDP0000601705 N 0.772
MDP0000899280 Malus domestica MDP0000899280 N 0.758
mgf019910m Mimulus guttatus mgf019910m N
mgf022319m Mimulus guttatus mgf022319m N 0.778
mgf022981m Mimulus guttatus mgf022981m N 0.774
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.782
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.782
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.758
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.772
NTT Vitis vinifera VIT_08s0007g08070 N 0.772
OB05G26090 Oryza brachyantha OB05G26090 N 0.771
OB08G26650 Oryza brachyantha OB08G26650 N 0.788
OBART01G37960 Oryza barthii OBART01G37960 N 0.771
OBART06G20890 Oryza barthii OBART06G20890 N 0.782
OBART08G19670 Oryza barthii OBART08G19670 N 0.788
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N 0.771
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.771
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.788
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.788
OMERI01G34920 Oryza meridionalis OMERI01G34920 N 0.771
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.788
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.788
ONIVA04G25710 Oryza nivara ONIVA04G25710 N 0.771
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.788
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.788
OPUNC01G36780 Oryza punctata OPUNC01G36780 N 0.771
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.788
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.788
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.778
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.788
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.773
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.827
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.772
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.767
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N 0.771
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.788
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.788
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N 0.771
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.788
OS01G0859100 Oryza sativa OS01G0859100 N 0.771
OS08G0504000 Oryza sativa OS08G0504000 N 0.788
OS09G0485600 Oryza sativa OS09G0485600 N 0.788
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.782
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.788
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.788
Pavir.J11927 Panicum virgatum Pavir.J11927 N 0.771
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.811
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.797
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.778
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.772
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.774
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N
PK03705.1 Cannabis sativa PK03705.1 N 0.772
PK05257.1 Cannabis sativa PK05257.1 N 0.797
Pm000471 Prunus mume Pm000471 N 0.778
Pm001374 Prunus mume Pm001374 N 0.827
Pm025853 Prunus mume Pm025853 N 0.772
Pm029018 Prunus mume Pm029018 N 0.758
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.774
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.802
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.798
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.827
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.802
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.827
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.758
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.772
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.772
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.758
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.827
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.778
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.772
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.782
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.827
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.758
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.803
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.758
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.758
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.782
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.788
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.771
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.782
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.782
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.758
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.758
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.758
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.758
Si013819m.g Setaria italica Si013819m.g N 0.788
Si022296m.g Setaria italica Si022296m.g N 0.771
Si029897m.g Setaria italica Si029897m.g N 0.782
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.811
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.774
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.778
TCM_005892 Theobroma cacao TCM_005892 N 0.802
TCM_011858 Theobroma cacao TCM_011858 N 0.758
TCM_024788 Theobroma cacao TCM_024788 N 0.772
TCM_034881 Theobroma cacao TCM_034881 N 0.788
TCM_040610 Theobroma cacao TCM_040610 N 0.788
TCM_041441 Theobroma cacao TCM_041441 N 0.827
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.772
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.785
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.758
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N 0.771
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.782
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.782
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.782
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.782
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.782
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.782
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.758
TT1 Vitis vinifera VIT_18s0001g05860 N 0.788
WIP2 Arabidopsis thaliana AT3G57670 N 0.772
WIP3 Arabidopsis thaliana AT1G08290 N 0.785
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.785
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.827
WIP6 Arabidopsis thaliana AT1G13290 N 0.758