Eucgr.A02831 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02831 T008107_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.720 0.900
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.720 0.900
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.688 0.860
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.688 0.860
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.688 0.860
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.688 0.860
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.681 0.820
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.681 0.820
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.681 0.820
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.679 0.860
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.679 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02831.1 AP2 34 85

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.681
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.720
DREB1A Arabidopsis thaliana AT4G25480 D 0.688
DREB1D Arabidopsis thaliana AT5G51990 D 0.720
DREB1C Arabidopsis thaliana AT4G25470 D 0.681
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.687
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.713
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.687
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.720
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.679
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.679
Bo7g110320 Brassica oleracea Bo7g110320 I 0.679
Bo8g050800 Brassica oleracea Bo8g050800 I 0.713
Bo9g104770 Brassica oleracea Bo9g104770 I 0.720
Bra019162 Brassica rapa Bra019162 I 0.679
Bra028290 Brassica rapa Bra028290 I 0.720
Bra010460 Brassica rapa Bra010460 I 0.713
PK23332.1 Cannabis sativa PK23332.1 I 0.710
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.720
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.717
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.687
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.687
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.720
Ca_18948 Cicer arietinum Ca_18948 I 0.678
Ca_04504 Cicer arietinum Ca_04504 I 0.749
Ca_02407 Cicer arietinum Ca_02407 N 0.687
Ca_03665 Cicer arietinum Ca_03665 N 0.685
Cla011674 Citrullus lanatus Cla011674 I 0.686
Cla006315 Citrullus lanatus Cla006315 I 0.709
Cla002362 Citrullus lanatus Cla002362 I 0.707
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.776
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.776
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.712
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.711
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.750
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.806
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.681
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.695
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.830
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.826
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.711
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.826
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.815
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.822
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.785
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.830
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.826
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.826
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.720
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.713
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.710
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.680
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.776
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.697
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.783
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.723
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.685
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.681
Lus10019455.g Linum usitatissimum Lus10019455.g I 0.712
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.680
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.723
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.723
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.770
mgf018631m Mimulus guttatus mgf018631m I 0.820
mgf022408m Mimulus guttatus mgf022408m I 0.820
mgf026642m Mimulus guttatus mgf026642m I 0.717
mgf018934m Mimulus guttatus mgf018934m I 0.820
mgf017477m Mimulus guttatus mgf017477m N 0.684
mgf016974m Mimulus guttatus mgf016974m I 0.820
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.680
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.731
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.723
Pm023777 Prunus mume Pm023777 N 0.706
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.706
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.698
30147.m014313 Ricinus communis 30147.m014313 I 0.697
30190.m011120 Ricinus communis 30190.m011120 I 0.677
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.716
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.701
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.678
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.710
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.709
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.705
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.702
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.739
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.743
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.747
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.693
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.688