BGIOSGA031001 (Oryza indica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BGIOSGA031001 T081549_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA031001-PA C2H2 ZF 357 378
BGIOSGA031001-PA C2H2 ZF 377 406

Links

Other C2H2 ZF family TFs
Other Oryza indica TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11193 Aegilops tauschii F775_11193 N 0.762
F775_14972 Aegilops tauschii F775_14972 N 0.821
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.758
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.767
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.788
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.788
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.767
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.788
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.769
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.768
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.758
WIP3 Arabidopsis thaliana AT1G08290 N 0.769
WIP6 Arabidopsis thaliana AT1G13290 N 0.767
WIP2 Arabidopsis thaliana AT3G57670 N 0.758
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.768
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.767
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.758
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.769
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.762
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N 0.762
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.827
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.821
Bo4g111000 Brassica oleracea Bo4g111000 N 0.758
Bo5g008880 Brassica oleracea Bo5g008880 N 0.759
Bo5g015200 Brassica oleracea Bo5g015200 N 0.767
Bo5g081360 Brassica oleracea Bo5g081360 N 0.781
Bo6g073120 Brassica oleracea Bo6g073120 N 0.758
Bo8g092070 Brassica oleracea Bo8g092070 N 0.758
Bo8g112550 Brassica oleracea Bo8g112550 N 0.759
Bra003295 Brassica rapa Bra003295 N 0.758
Bra007346 Brassica rapa Bra007346 N 0.756
Bra014612 Brassica rapa Bra014612 N 0.758
Bra018638 Brassica rapa Bra018638 N 0.759
Bra019822 Brassica rapa Bra019822 N 0.767
Bra031621 Brassica rapa Bra031621 N 0.759
PK03705.1 Cannabis sativa PK03705.1 N 0.758
PK05257.1 Cannabis sativa PK05257.1 N 0.782
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.758
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.768
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.767
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.769
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.769
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.767
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.768
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.758
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.797
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.788
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.767
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.758
Ca_07051 Cicer arietinum Ca_07051 N 0.788
Ca_07269 Cicer arietinum Ca_07269 N 0.758
Ca_08435 Cicer arietinum Ca_08435 N 0.767
Ca_16482 Cicer arietinum Ca_16482 N 0.782
Ca_21713 Cicer arietinum Ca_21713 N 0.774
Ca_24699 Cicer arietinum Ca_24699 N 0.767
Ca_27078 Cicer arietinum Ca_27078 N 0.774
Cla000184 Citrullus lanatus Cla000184 N 0.774
Cla002714 Citrullus lanatus Cla002714 N 0.767
Cla008187 Citrullus lanatus Cla008187 N 0.758
Cla008675 Citrullus lanatus Cla008675 N 0.758
Cla015481 Citrullus lanatus Cla015481 N 0.787
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.774
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.758
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.758
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.788
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.758
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.758
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.774
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.783
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.788
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.758
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.758
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.787
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.787
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.774
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.758
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.767
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.758
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.758
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.767
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.788
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.764
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.767
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.777
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.758
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.769
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.767
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.758
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.758
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.758
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.788
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.767
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.767
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.758
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.793
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.767
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.788
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.788
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.788
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.793
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.774
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.793
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.788
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.774
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.793
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.758
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.767
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.788
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.758
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.758
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.787
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.787
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.788
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.758
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.787
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.774
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.767
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.767
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.821
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.767
LPERR01G32600 Leersia perrieri LPERR01G32600 N 0.762
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.827
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.827
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.788
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.788
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.767
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.778
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.758
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.758
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.774
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.767
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.778
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.758
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.767
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.782
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.774
MDP0000131949 Malus domestica MDP0000131949 N 0.788
MDP0000142494 Malus domestica MDP0000142494 N 0.774
MDP0000144266 Malus domestica MDP0000144266 N 0.776
MDP0000300013 Malus domestica MDP0000300013 N 0.788
MDP0000303483 Malus domestica MDP0000303483 N 0.767
MDP0000403797 Malus domestica MDP0000403797 N 0.758
MDP0000573922 Malus domestica MDP0000573922 N 0.771
MDP0000580545 Malus domestica MDP0000580545 N 0.758
MDP0000601705 Malus domestica MDP0000601705 N 0.758
MDP0000899280 Malus domestica MDP0000899280 N 0.758
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.788
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.788
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.758
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.787
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.758
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.774
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.767
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.767
mgf019910m Mimulus guttatus mgf019910m N 0.782
mgf022319m Mimulus guttatus mgf022319m N 0.787
mgf022981m Mimulus guttatus mgf022981m N 0.764
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.787
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.767
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.778
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.787
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.758
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.758
OBART01G37960 Oryza barthii OBART01G37960 N 0.762
OBART06G20890 Oryza barthii OBART06G20890 N 0.767
OBART08G19670 Oryza barthii OBART08G19670 N 0.827
OB05G26090 Oryza brachyantha OB05G26090 N 0.762
OB08G26650 Oryza brachyantha OB08G26650 N 0.827
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N 0.762
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.827
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.827
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N 0.762
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.762
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.827
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.827
BGIOSGA000452 Oryza indica BGIOSGA000452 N 0.762
OMERI01G34920 Oryza meridionalis OMERI01G34920 N 0.762
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.827
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.827
ONIVA04G25710 Oryza nivara ONIVA04G25710 N 0.762
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.827
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.827
OPUNC01G36780 Oryza punctata OPUNC01G36780 N 0.762
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.827
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.827
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N 0.762
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.827
OS01G0859100 Oryza sativa OS01G0859100 N 0.762
OS08G0504000 Oryza sativa OS08G0504000 N 0.827
OS09G0485600 Oryza sativa OS09G0485600 N 0.827
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.821
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.827
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.827
Pavir.J11927 Panicum virgatum Pavir.J11927 N 0.762
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.767
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.767
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.782
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.787
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.764
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.788
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.787
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.788
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.767
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.758
Pm000471 Prunus mume Pm000471 N 0.758
Pm001374 Prunus mume Pm001374 N 0.788
Pm025853 Prunus mume Pm025853 N 0.758
Pm029018 Prunus mume Pm029018 N 0.767
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.758
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.767
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.788
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.758
27810.m000651 Ricinus communis 27810.m000651 N 0.758
29908.m006047 Ricinus communis 29908.m006047 N 0.774
30055.m001542 Ricinus communis 30055.m001542 N 0.788
30061.m000294 Ricinus communis 30061.m000294 N 0.787
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.758
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.768
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.788
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.758
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.811
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.767
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.758
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.767
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.767
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.767
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.767
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.767
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.767
Si013819m.g Setaria italica Si013819m.g N 0.827
Si022296m.g Setaria italica Si022296m.g N 0.762
Si029897m.g Setaria italica Si029897m.g N 0.821
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.778
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.764
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.758
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.758
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.778
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.788
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.758
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.758
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.764
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.758
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.821
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.827
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.762
TCM_005892 Theobroma cacao TCM_005892 N 0.787
TCM_011858 Theobroma cacao TCM_011858 N 0.767
TCM_024788 Theobroma cacao TCM_024788 N 0.758
TCM_034881 Theobroma cacao TCM_034881 N 0.774
TCM_040610 Theobroma cacao TCM_040610 N 0.767
TCM_041441 Theobroma cacao TCM_041441 N 0.788
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N 0.762
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.821
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.821
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.767
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.821
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.767
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.821
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.767
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.788
NTT Vitis vinifera VIT_08s0007g08070 N 0.758
TT1 Vitis vinifera VIT_18s0001g05860 N 0.774
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.762
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.767
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.827
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.821
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.827