CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Fbxl19
(
Rattus norvegicus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSRNOG00000018986
T168291_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000059635
CxxC
11
57
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
ENSRNOP00000075629
CxxC
11
57
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Rattus norvegicus
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_05774
Aegilops tauschii
F775_05774
I
0.000
F775_32062
Aegilops tauschii
F775_32062
I
0.000
AMTR_s00023p00044590
Amborella trichopoda
AMTR_s00023p00044590
I
0.000
Aquca_004_00452
Aquilegia coerulea
Aquca_004_00452
I
0.000
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.000
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.000
fgenesh2_kg.2__1828__AT1G75490.1
Arabidopsis lyrata
fgenesh2_kg.2__1828__AT1G75490.1
I
0.000
DREB2C
Arabidopsis lyrata
scaffold_402826.1
I
0.000
scaffold_601912.1
Arabidopsis lyrata
scaffold_601912.1
I
0.000
DREB2D
Arabidopsis thaliana
AT1G75490
D
0.000
AT2G40350
Arabidopsis thaliana
AT2G40350
I
0.000
DREB2G
Arabidopsis thaliana
AT5G18450
D
0.000
Bostr.13129s0423
Boechera stricta
Bostr.13129s0423
I
0.000
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.000
Bostr.26527s0367
Boechera stricta
Bostr.26527s0367
I
0.000
Bostr.3288s0201
Boechera stricta
Bostr.3288s0201
I
0.000
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.000
Bo2g083920
Brassica oleracea
Bo2g083920
I
0.000
Bo4g190040
Brassica oleracea
Bo4g190040
I
0.000
Bo6g086320
Brassica oleracea
Bo6g086320
I
0.000
Bo6g119660
Brassica oleracea
Bo6g119660
I
0.000
Bo9g155940
Brassica oleracea
Bo9g155940
I
0.000
Bo9g177130
Brassica oleracea
Bo9g177130
I
0.000
Bra002159
Brassica rapa
Bra002159
I
0.000
Bra003752
Brassica rapa
Bra003752
I
0.000
Bra008200
Brassica rapa
Bra008200
I
0.000
Bra015840
Brassica rapa
Bra015840
I
0.000
Bra017011
Brassica rapa
Bra017011
I
0.000
PK07402.1
Cannabis sativa
PK07402.1
D
0.000
PK07829.1
Cannabis sativa
PK07829.1
I
0.000
Cagra.0712s0008
Capsella grandiflora
Cagra.0712s0008
I
0.000
Cagra.0799s0022
Capsella grandiflora
Cagra.0799s0022
I
0.000
Carubv10002425m.g
Capsella rubella
Carubv10002425m.g
I
0.000
Carubv10020960m.g
Capsella rubella
Carubv10020960m.g
I
0.000
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.000
evm.TU.supercontig_51.23
Carica papaya
evm.TU.supercontig_51.23
I
0.000
evm.TU.supercontig_99.20
Carica papaya
evm.TU.supercontig_99.20
I
0.000
Ca_10770
Cicer arietinum
Ca_10770
I
0.000
Ca_12446
Cicer arietinum
Ca_12446
I
0.000
Ca_22585
Cicer arietinum
Ca_22585
I
0.000
Cla001755
Citrullus lanatus
Cla001755
I
0.000
Cla006713
Citrullus lanatus
Cla006713
I
0.000
Cla012194
Citrullus lanatus
Cla012194
I
0.000
Cla021113
Citrullus lanatus
Cla021113
I
0.000
Cla022803
Citrullus lanatus
Cla022803
I
0.000
Ciclev10002280m.g
Citrus clementina
Ciclev10002280m.g
I
0.000
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.000
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.000
orange1.1g036655m.g
Citrus sinensis
orange1.1g036655m.g
I
0.000
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.000
Cucsa.130200
Cucumis sativus
Cucsa.130200
I
0.000
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.000
Cucsa.231820
Cucumis sativus
Cucsa.231820
I
0.000
Cucsa.342750
Cucumis sativus
Cucsa.342750
I
0.000
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.000
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.000
Thhalv10015907m.g
Eutrema salsugineum
Thhalv10015907m.g
I
0.000
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.000
Thhalv10019142m.g
Eutrema salsugineum
Thhalv10019142m.g
I
0.000
Thhalv10021161m.g
Eutrema salsugineum
Thhalv10021161m.g
I
0.000
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.000
gene08479-v1.0-hybrid
Fragaria vesca
gene08479-v1.0-hybrid
I
0.000
gene16710-v1.0-hybrid
Fragaria vesca
gene16710-v1.0-hybrid
I
0.000
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.000
GLYMA02G42960
Glycine max
GLYMA02G42960
I
0.000
GLYMA04G03070
Glycine max
GLYMA04G03070
I
0.000
GLYMA06G03110
Glycine max
GLYMA06G03110
I
0.000
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.000
GLYMA12G11150
Glycine max
GLYMA12G11150
I
0.000
GLYMA12G32400
Glycine max
GLYMA12G32400
I
0.000
GLYMA13G38030
Glycine max
GLYMA13G38030
I
0.000
GLYMA14G06080
Glycine max
GLYMA14G06080
I
0.000
GLYMA14G07620
Glycine max
GLYMA14G07620
I
0.000
GLYMA17G37350
Glycine max
GLYMA17G37350
I
0.000
Gorai.005G110100
Gossypium raimondii
Gorai.005G110100
I
0.000
Gorai.007G271900
Gossypium raimondii
Gorai.007G271900
I
0.000
Gorai.009G197800
Gossypium raimondii
Gorai.009G197800
I
0.000
Gorai.009G271400
Gossypium raimondii
Gorai.009G271400
I
0.000
Gorai.011G235900
Gossypium raimondii
Gorai.011G235900
I
0.000
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.000
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.000
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.000
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.000
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.000
LjSGA_063888.1
Lotus japonicus
LjSGA_063888.1
I
0.000
MDP0000141335
Malus domestica
MDP0000141335
I
0.000
MDP0000147009
Malus domestica
MDP0000147009
I
0.000
MDP0000153866
Malus domestica
MDP0000153866
I
0.000
MDP0000165880
Malus domestica
MDP0000165880
I
0.000
MDP0000250924
Malus domestica
MDP0000250924
I
0.000
MDP0000250927
Malus domestica
MDP0000250927
I
0.000
MDP0000290585
Malus domestica
MDP0000290585
I
0.000
MDP0000295902
Malus domestica
MDP0000295902
I
0.000
MDP0000446783
Malus domestica
MDP0000446783
I
0.000
MDP0000880312
Malus domestica
MDP0000880312
I
0.000
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.000
cassava25887.m1
Manihot esculenta
cassava25887.m1
I
0.000
cassava41240.m1
Manihot esculenta
cassava41240.m1
I
0.000
cassava45031.m1
Manihot esculenta
cassava45031.m1
I
0.000
MTR_1g023170
Medicago truncatula
MTR_1g023170
I
0.000
MTR_5g083330
Medicago truncatula
MTR_5g083330
I
0.000
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.000
mgf007881m
Mimulus guttatus
mgf007881m
I
0.000
mgf017629m
Mimulus guttatus
mgf017629m
I
0.000
mgf024545m
Mimulus guttatus
mgf024545m
I
0.000
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.000
GSMUA_Achr3G00320_001
Musa acuminata
GSMUA_Achr3G00320_001
I
0.000
GSMUA_Achr5G28050_001
Musa acuminata
GSMUA_Achr5G28050_001
I
0.000
GSMUA_Achr6G32780_001
Musa acuminata
GSMUA_Achr6G32780_001
I
0.000
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.000
GSMUA_AchrUn_randomG08690_001
Musa acuminata
GSMUA_AchrUn_randomG08690_001
I
0.000
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.000
OBART01G04210
Oryza barthii
OBART01G04210
I
0.000
OB01G13930
Oryza brachyantha
OB01G13930
I
0.000
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.000
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.000
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.000
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.000
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.000
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.000
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.000
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.000
DREB2A
Oryza sativa
OS01G0165000
I
0.000
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.000
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.000
Pavir.Ea00429
Panicum virgatum
Pavir.Ea00429
I
0.000
Pavir.J37967
Panicum virgatum
Pavir.J37967
I
0.000
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.000
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
0.000
POPTR_0002s03090
Populus trichocarpa
POPTR_0002s03090
I
0.000
POPTR_0005s25470
Populus trichocarpa
POPTR_0005s25470
I
0.000
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.000
Pm003634
Prunus mume
Pm003634
I
0.000
Pm006274
Prunus mume
Pm006274
I
0.000
Pm015262
Prunus mume
Pm015262
I
0.000
Pm018989
Prunus mume
Pm018989
I
0.000
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.000
PRUPE_ppa022733mg
Prunus persica
PRUPE_ppa022733mg
I
0.000
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.000
PRUPE_ppa023248mg
Prunus persica
PRUPE_ppa023248mg
I
0.000
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.000
29729.m002292
Ricinus communis
29729.m002292
I
0.000
30170.m014115
Ricinus communis
30170.m014115
I
0.000
SapurV1A.0188s0060
Salix purpurea
SapurV1A.0188s0060
I
0.000
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.000
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.000
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.000
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.000
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
0.000
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
0.000
Si002067m.g
Setaria italica
Si002067m.g
I
0.000
Si022619m.g
Setaria italica
Si022619m.g
I
0.000
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
0.000
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.000
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.000
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
0.000
Sb03g004980
Sorghum bicolor
Sb03g004980
I
0.000
Sb07g023575
Sorghum bicolor
Sb07g023575
I
0.000
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.000
TCM_034132
Theobroma cacao
TCM_034132
I
0.000
TCM_043275
Theobroma cacao
TCM_043275
I
0.000
TCM_043302
Theobroma cacao
TCM_043302
I
0.000
TCM_043306
Theobroma cacao
TCM_043306
I
0.000
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.000
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.000
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.000
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.000
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.000
Traes_5BL_7F0FD1538
Triticum aestivum
Traes_5BL_7F0FD1538
I
0.000
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.000
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.000
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.000
VIT_18s0001g13320
Vitis vinifera
VIT_18s0001g13320
I
0.000
GRMZM2G006745
Zea mays
GRMZM2G006745
I
0.000
GRMZM2G156737
Zea mays
GRMZM2G156737
I
0.000
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.000