nhr-47 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003637 T306161_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.905 0.671
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.871 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
C24G6.4 Nuclear receptor 9 78

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I 0.873
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.914
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.914
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I 0.868
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.801
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.905
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.746
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.914
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I 0.868
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.895
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.984
ASIM_0001238601 Anisakis simplex ASIM_0001238601 N 0.776
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.980
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.769
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.912
ASU_02770 Ascaris suum ASU_02770 I 0.754
ASU_03657 Ascaris suum ASU_03657 I 0.769
ASU_03870 Ascaris suum ASU_03870 I 0.871
ASU_10584 Ascaris suum ASU_10584 I 0.979
ASU_12501 Ascaris suum ASU_12501 I 0.912
Bm4980 Brugia malayi Bm4980 I 0.884
Bm5319 Brugia malayi Bm5319 I 0.902
Bm5520 Brugia malayi Bm5520 I 0.873
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.884
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.839
BTMF_0001127801 Brugia timori BTMF_0001127801 I 0.873
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.902
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.982
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.843
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.873
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.844
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.837
CBN07240 Caenorhabditis brenneri CBN07240 I 0.825
CBN11572 Caenorhabditis brenneri CBN11572 I 0.765
CBN15481 Caenorhabditis brenneri CBN15481 I 0.992
CBN18198 Caenorhabditis brenneri CBN18198 I 0.871
CBN19235 Caenorhabditis brenneri CBN19235 I 0.905
CBN20518 Caenorhabditis brenneri CBN20518 I 0.920
CBN20749 Caenorhabditis brenneri CBN20749 I 0.871
CBN21115 Caenorhabditis brenneri CBN21115 I 0.868
CBN24827 Caenorhabditis brenneri CBN24827 I 0.790
CBN28528 Caenorhabditis brenneri CBN28528 I 0.992
CBN30215 Caenorhabditis brenneri CBN30215 I 0.793
CBG00093 Caenorhabditis briggsae CBG00093 I 0.829
CBG01866 Caenorhabditis briggsae CBG01866 I 0.905
CBG02077 Caenorhabditis briggsae CBG02077 I 0.869
CBG03844 Caenorhabditis briggsae CBG03844 I 0.871
CBG09380 Caenorhabditis briggsae CBG09380 I 0.985
CBG10855 Caenorhabditis briggsae CBG10855 I 0.780
CBG14485 Caenorhabditis briggsae CBG14485 I 0.755
CBG16594 Caenorhabditis briggsae CBG16594 I 0.920
CBG23318 Caenorhabditis briggsae CBG23318 I 0.806
CBG23319 Caenorhabditis briggsae CBG23319 I 0.889
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.905
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.912
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.829
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.765
nhr-40 Caenorhabditis elegans WBGene00003630 I 0.842
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.871
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.806
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.843
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.780
CJA06153 Caenorhabditis japonica CJA06153 I 0.829
CJA08896 Caenorhabditis japonica CJA08896 I 0.780
CJA13458 Caenorhabditis japonica CJA13458 I 0.905
CJA16040 Caenorhabditis japonica CJA16040 I 0.755
CJA37776 Caenorhabditis japonica CJA37776 I 0.770
CRE00149 Caenorhabditis remanei CRE00149 I 0.797
CRE00809 Caenorhabditis remanei CRE00809 I 0.755
CRE03310 Caenorhabditis remanei CRE03310 I 0.905
CRE07549 Caenorhabditis remanei CRE07549 I 0.869
CRE08259 Caenorhabditis remanei CRE08259 I 0.871
CRE24074 Caenorhabditis remanei CRE24074 I 0.829
CRE25378 Caenorhabditis remanei CRE25378 I 0.921
CRE26981 Caenorhabditis remanei CRE26981 I 0.831
CRE26982 Caenorhabditis remanei CRE26982 I 0.800
CRE30787 Caenorhabditis remanei CRE30787 I 0.992
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.746
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.980
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.895
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I 0.869
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.902
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.850
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.928
DME_0001010101 Dracunculus medinensis DME_0001010101 I 0.873
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I 0.873
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.836
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.906
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.754
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.879
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.821
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.872
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.922
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.746
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.986
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.789
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.905
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.986
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.922
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.787
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.905
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.984
LOAG_00300 Loa loa LOAG_00300 I 0.902
LOAG_03407 Loa loa LOAG_03407 I 0.873
LOAG_08615 Loa loa LOAG_08615 I 0.871
LOAG_16377 Loa loa LOAG_16377 I 0.839
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.814
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.975
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.975
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.795
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.895
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.970
NECAME_00872 Necator americanus NECAME_00872 I 0.912
NECAME_06702 Necator americanus NECAME_06702 I 0.839
NECAME_08394 Necator americanus NECAME_08394 I 0.806
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.986
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.902
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.902
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.869
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I 0.873
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.869
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.834
WBGene00240723 Onchocerca volvulus WBGene00240723 I 0.873
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.894
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.871
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.769
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.953
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.838
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.805
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.848
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.827
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.774
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.917
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.873
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.766
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.982
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.801
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.767
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.847
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.871
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.847
PPA20196 Pristionchus pacificus PPA20196 I 0.766
PPA21777 Pristionchus pacificus PPA21777 I 0.806
PPA24468 Pristionchus pacificus PPA24468 I 0.873
PPA24481 Pristionchus pacificus PPA24481 I 0.767
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.839
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.875
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.868
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.908
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.904
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.979
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.912
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.814
L596_g702 Steinernema carpocapsae L596_g702 I 0.849
L889_g1557 Steinernema feltiae L889_g1557 I 0.822
L889_g17247 Steinernema feltiae L889_g17247 I 0.833
L889_g1891 Steinernema feltiae L889_g1891 I 0.795
L889_g22901 Steinernema feltiae L889_g22901 I 0.979
L889_g29879 Steinernema feltiae L889_g29879 I 0.904
L889_g7780 Steinernema feltiae L889_g7780 I 0.908
L889_g8914 Steinernema feltiae L889_g8914 I 0.753
L893_g13285 Steinernema glaseri L893_g13285 I 0.869
L893_g15045 Steinernema glaseri L893_g15045 I 0.802
L893_g15276 Steinernema glaseri L893_g15276 I 0.979
L893_g22683 Steinernema glaseri L893_g22683 I 0.754
L893_g25227 Steinernema glaseri L893_g25227 I 0.912
L893_g28857 Steinernema glaseri L893_g28857 I 0.816
L893_g3010 Steinernema glaseri L893_g3010 I 0.904
L893_g3565 Steinernema glaseri L893_g3565 I 0.803
L898_g22454 Steinernema monticolum L898_g22454 I 0.908
L898_g26357 Steinernema monticolum L898_g26357 I 0.833
L898_g2764 Steinernema monticolum L898_g2764 I 0.904
L898_g30390 Steinernema monticolum L898_g30390 I 0.791
L898_g8573 Steinernema monticolum L898_g8573 I 0.979
L898_g9866 Steinernema monticolum L898_g9866 I 0.824
L892_g17612 Steinernema scapterisci L892_g17612 I 0.797
L892_g4169 Steinernema scapterisci L892_g4169 I 0.814
L892_g5067 Steinernema scapterisci L892_g5067 I 0.849
L892_g5079 Steinernema scapterisci L892_g5079 I 0.979
L892_g8671 Steinernema scapterisci L892_g8671 I 0.908
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.854
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.957
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.913
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.804
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.774
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.774
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.828
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.849
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.838
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.849
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.805
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.959
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.899
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.828
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.774
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.893
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.838
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.838
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.848
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.849
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.828
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.774
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.959
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.804
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.913
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.976
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.754
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.905
SMUV_0000795201 Syphacia muris SMUV_0000795201 I 0.873
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I 0.868
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.902
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.876
WUBG_08038 Wuchereria bancrofti WUBG_08038 I 0.873