Solyc11g005380.1 (Solanum lycopersicum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Solyc11g005380.1 T249893_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g005380.1.1 MADF 69 139
Solyc11g005380.1.1 MADF 380 450

Links

Other MADF family TFs
Other Solanum lycopersicum TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.965
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.916
Cla007910 Citrullus lanatus Cla007910 I 0.912
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.896
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.896
Ca_04386 Cicer arietinum Ca_04386 I 0.889
PK26613.1 Cannabis sativa PK26613.1 I 0.888
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.887
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.887
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.884
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.883
mgf015314m Mimulus guttatus mgf015314m N 0.882
30206.m000769 Ricinus communis 30206.m000769 I 0.880
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.879
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.879
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.878
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.878
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.878
TCM_035565 Theobroma cacao TCM_035565 I 0.875
mgf021983m Mimulus guttatus mgf021983m I 0.875
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.874
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.874
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.874
29576.m000223 Ricinus communis 29576.m000223 I 0.873
mgf018892m Mimulus guttatus mgf018892m N 0.873
Bra003702 Brassica rapa Bra003702 I 0.872
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.871
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.871
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.870
TCM_001348 Theobroma cacao TCM_001348 I 0.870
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.869
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.869
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.869
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.869
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.869
PK24122.1 Cannabis sativa PK24122.1 I 0.867
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.865
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.865
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.864
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.864
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.864
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.863
TCM_035571 Theobroma cacao TCM_035571 I 0.863
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.863
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.862
Bra008285 Brassica rapa Bra008285 I 0.859
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.859
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.858
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.857
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.854
Ca_25135 Cicer arietinum Ca_25135 I 0.853
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.851
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.849
Ca_04385 Cicer arietinum Ca_04385 I 0.849
Bra003703 Brassica rapa Bra003703 I 0.848
Bo6g083690 Brassica oleracea Bo6g083690 I 0.847
Bo6g120870 Brassica oleracea Bo6g120870 I 0.847
Bra015716 Brassica rapa Bra015716 I 0.847
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.847
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.847
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.847
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.847
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.847
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.844
Cla001992 Citrullus lanatus Cla001992 I 0.844
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.844
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.844
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.842
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.842
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.842
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.840
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.840
Bo2g091240 Brassica oleracea Bo2g091240 I 0.837
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.836
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.836
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.830
MDP0000156139 Malus domestica MDP0000156139 I 0.830
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.829
MDP0000451107 Malus domestica MDP0000451107 I 0.826
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.823
Pm022572 Prunus mume Pm022572 I 0.823
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.823
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.820
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.816
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.815
Bo8g027460 Brassica oleracea Bo8g027460 I 0.814
Bra036731 Brassica rapa Bra036731 I 0.814