30206.m000769 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 30206.m000769 T250452_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.876 0.679
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.876 0.679
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30206.m000769 MADF 57 127
30206.m000769 MADF 257 328

Links

Other MADF family TFs
Other Ricinus communis TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.959
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.959
TCM_001348 Theobroma cacao TCM_001348 I 0.956
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.948
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.945
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.942
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.942
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.942
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.940
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.940
MDP0000156139 Malus domestica MDP0000156139 I 0.940
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.938
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.938
Pm022572 Prunus mume Pm022572 I 0.938
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.938
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.936
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.936
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.936
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.936
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.935
MDP0000451107 Malus domestica MDP0000451107 I 0.935
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.935
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.932
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.932
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.932
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.932
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.930
Cla007910 Citrullus lanatus Cla007910 I 0.929
Pm022570 Prunus mume Pm022570 I 0.929
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.927
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.927
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.926
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.926
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.926
Ca_04386 Cicer arietinum Ca_04386 I 0.926
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.926
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.926
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.925
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.925
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.925
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.924
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.923
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.922
Bo6g083690 Brassica oleracea Bo6g083690 I 0.920
Bo6g120870 Brassica oleracea Bo6g120870 I 0.920
Bra015716 Brassica rapa Bra015716 I 0.920
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.920
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.920
TCM_035565 Theobroma cacao TCM_035565 I 0.920
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.920
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.920
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.920
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.920
PK26613.1 Cannabis sativa PK26613.1 I 0.920
Bra003703 Brassica rapa Bra003703 I 0.919
Ca_25135 Cicer arietinum Ca_25135 I 0.919
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.918
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.918
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.917
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.917
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.914
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.914
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.914
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.913
Bo8g027460 Brassica oleracea Bo8g027460 I 0.912
Bra036731 Brassica rapa Bra036731 I 0.912
Ca_04385 Cicer arietinum Ca_04385 I 0.912
Bra008285 Brassica rapa Bra008285 I 0.911
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.911
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.911
PK24122.1 Cannabis sativa PK24122.1 I 0.910
Cla001992 Citrullus lanatus Cla001992 I 0.909
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.909
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.908
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.908
29576.m000223 Ricinus communis 29576.m000223 I 0.907
mgf015314m Mimulus guttatus mgf015314m N 0.907
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.905
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.905
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.904
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.904
F775_26337 Aegilops tauschii F775_26337 I 0.902
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.902
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.902
Bo2g091240 Brassica oleracea Bo2g091240 I 0.901
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.901
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.900
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.900
mgf021983m Mimulus guttatus mgf021983m I 0.899
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.898
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.897
mgf018892m Mimulus guttatus mgf018892m N 0.897
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.896
OBART04G20290 Oryza barthii OBART04G20290 I 0.896
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.896
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.896
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.896
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.896
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.895
TCM_035571 Theobroma cacao TCM_035571 I 0.895
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.895
mgf004276m Mimulus guttatus mgf004276m I 0.895
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.895
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.894
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.894
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.893
OB04G27270 Oryza brachyantha OB04G27270 I 0.892
OBART02G25970 Oryza barthii OBART02G25970 I 0.892
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.892
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.892
MDP0000701272 Malus domestica MDP0000701272 I 0.891
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.890
Cla005046 Citrullus lanatus Cla005046 I 0.890
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.890
Bra003702 Brassica rapa Bra003702 I 0.888
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.888
OB02G33250 Oryza brachyantha OB02G33250 I 0.887
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.886
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.886
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.886
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.886
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.886
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.886
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.886
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.884
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.884
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.883
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.883
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.883
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.883
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.883
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.883
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.882
Si012121m.g Setaria italica Si012121m.g I 0.882
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.882
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.881
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.881
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.881
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.881
Bo6g049430 Brassica oleracea Bo6g049430 I 0.880
Bra040010 Brassica rapa Bra040010 I 0.880
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.880
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.880
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.880
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.879
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.878
Si034382m.g Setaria italica Si034382m.g I 0.877
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.876
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.876
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.876
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.876
Pm024289 Prunus mume Pm024289 I 0.876
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.876
MDP0000451038 Malus domestica MDP0000451038 I 0.875
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.873
Pm001889 Prunus mume Pm001889 I 0.873
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.872
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.872
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.871
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.871
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.871
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.871
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.871
TCM_015563 Theobroma cacao TCM_015563 I 0.870
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.870
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.870
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.870
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.868
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.868
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.866
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.863
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.863
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.862
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.860
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.860
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.860
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.860
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.859
Si016578m.g Setaria italica Si016578m.g I 0.857
30068.m002635 Ricinus communis 30068.m002635 I 0.857
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.853
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.851
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.850
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.849
F775_24861 Aegilops tauschii F775_24861 N 0.845
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.842
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.836
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.836
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.836
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.836
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.828
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.818
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.817