MDP0000701272 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000701272 T250784_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.898 0.809
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.898 0.809
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000701272 MADF 100 170
MDP0000701272 MADF 490 560

Links

Other MADF family TFs
Other Malus domestica TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.961
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.961
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.960
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.959
Si012121m.g Setaria italica Si012121m.g I 0.959
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.959
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.959
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.957
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.957
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.957
Pm024289 Prunus mume Pm024289 I 0.957
MDP0000451038 Malus domestica MDP0000451038 I 0.957
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.956
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.956
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.955
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.955
OB04G27270 Oryza brachyantha OB04G27270 I 0.955
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.955
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.955
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.954
F775_26337 Aegilops tauschii F775_26337 I 0.954
OBART04G20290 Oryza barthii OBART04G20290 I 0.954
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.954
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.954
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.954
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.954
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.954
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.953
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.953
TCM_015563 Theobroma cacao TCM_015563 I 0.953
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.952
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.952
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.952
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.951
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.951
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.951
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.951
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.951
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.949
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.948
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.948
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.948
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.948
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.948
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.948
Cla005046 Citrullus lanatus Cla005046 I 0.948
30068.m002635 Ricinus communis 30068.m002635 I 0.947
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.947
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.947
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.947
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.945
Si034382m.g Setaria italica Si034382m.g I 0.945
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.941
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.939
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.939
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.939
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.939
mgf004276m Mimulus guttatus mgf004276m I 0.939
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.938
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.937
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.936
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.934
OBART02G25970 Oryza barthii OBART02G25970 I 0.933
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.933
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.933
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.933
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.933
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.932
OB02G33250 Oryza brachyantha OB02G33250 I 0.930
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.929
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.927
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.927
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.927
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.927
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.927
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.925
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.922
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.921
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.919
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.919
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.918
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.918
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.917
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.915
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.912
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.910
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.910
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.910
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.909
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.909
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.909
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.909
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.907
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.907
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.906
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.904
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.904
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.904
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.903
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.903
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.903
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.902
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.902
Bo6g049430 Brassica oleracea Bo6g049430 I 0.901
Bra040010 Brassica rapa Bra040010 I 0.901
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.901
Si016578m.g Setaria italica Si016578m.g I 0.901
MDP0000156139 Malus domestica MDP0000156139 I 0.901
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.901
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.901
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.900
Pm022572 Prunus mume Pm022572 I 0.900
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.899
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.899
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.898
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.898
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.898
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.898
mgf021983m Mimulus guttatus mgf021983m I 0.898
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.897
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.897
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.897
TCM_035565 Theobroma cacao TCM_035565 I 0.897
29576.m000223 Ricinus communis 29576.m000223 I 0.897
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.896
MDP0000451107 Malus domestica MDP0000451107 I 0.896
PK24122.1 Cannabis sativa PK24122.1 I 0.896
Bo6g083690 Brassica oleracea Bo6g083690 I 0.895
Bo6g120870 Brassica oleracea Bo6g120870 I 0.895
Bra015716 Brassica rapa Bra015716 I 0.895
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.895
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.895
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.895
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.895
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.895
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.895
Bra003703 Brassica rapa Bra003703 I 0.894
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.893
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.893
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.893
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.892
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.892
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.891
Pm022570 Prunus mume Pm022570 I 0.891
30206.m000769 Ricinus communis 30206.m000769 I 0.891
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.890
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.890
F775_24861 Aegilops tauschii F775_24861 N 0.889
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.889
Ca_25135 Cicer arietinum Ca_25135 I 0.888
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.887
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.887
Ca_04386 Cicer arietinum Ca_04386 I 0.887
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.887
TCM_035571 Theobroma cacao TCM_035571 I 0.886
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.885
Bra008285 Brassica rapa Bra008285 I 0.884
Ca_04385 Cicer arietinum Ca_04385 I 0.884
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.883
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.883
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.882
TCM_001348 Theobroma cacao TCM_001348 I 0.881
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.880
mgf018892m Mimulus guttatus mgf018892m N 0.880
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.880
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.878
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.877
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.875
Cla001992 Citrullus lanatus Cla001992 I 0.873
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.873
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.873
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.872
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.871
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.870
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.870
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.869
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.869
Bo8g027460 Brassica oleracea Bo8g027460 I 0.865
Bra036731 Brassica rapa Bra036731 I 0.865
Cla007910 Citrullus lanatus Cla007910 I 0.865
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.861
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.858
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.858
Bra003702 Brassica rapa Bra003702 I 0.845
Pm001889 Prunus mume Pm001889 I 0.844
PK26613.1 Cannabis sativa PK26613.1 I 0.838
Bo2g091240 Brassica oleracea Bo2g091240 I 0.834
mgf015314m Mimulus guttatus mgf015314m N 0.813