LPERR03G01010 (Leersia perrieri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 LPERR03G01010 T249355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.891 0.734
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.891 0.734
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR03G01010.1 MADF 86 157
LPERR03G01010.1 MADF 408 480

Links

Other MADF family TFs
Other Leersia perrieri TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.970
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.970
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.967
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.967
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.966
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.960
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.958
Si034382m.g Setaria italica Si034382m.g I 0.958
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.956
Cla005046 Citrullus lanatus Cla005046 I 0.950
F775_26337 Aegilops tauschii F775_26337 I 0.949
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.949
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.949
OB04G27270 Oryza brachyantha OB04G27270 I 0.949
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.949
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.949
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.949
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.948
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.947
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.947
OBART04G20290 Oryza barthii OBART04G20290 I 0.947
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.947
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.947
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.947
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.947
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.947
Pm024289 Prunus mume Pm024289 I 0.947
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.947
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.946
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.945
MDP0000451038 Malus domestica MDP0000451038 I 0.945
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.944
Si012121m.g Setaria italica Si012121m.g I 0.944
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.943
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.941
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.941
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.940
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.940
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.940
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.940
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.940
TCM_015563 Theobroma cacao TCM_015563 I 0.940
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.940
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.938
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.938
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.938
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.938
MDP0000701272 Malus domestica MDP0000701272 I 0.937
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.935
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.934
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.933
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.933
30068.m002635 Ricinus communis 30068.m002635 I 0.933
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.933
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.933
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.933
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.931
OB02G33250 Oryza brachyantha OB02G33250 I 0.931
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.931
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.931
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.931
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.931
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.930
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.930
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.930
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.928
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.928
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.928
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.928
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.928
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.926
OBART02G25970 Oryza barthii OBART02G25970 I 0.922
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.922
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.915
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.913
Si016578m.g Setaria italica Si016578m.g I 0.913
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.912
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.910
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.910
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.909
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.909
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.907
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.907
mgf004276m Mimulus guttatus mgf004276m I 0.907
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.906
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.906
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.905
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.904
29576.m000223 Ricinus communis 29576.m000223 I 0.902
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.900
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.900
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.896
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.895
Bo6g049430 Brassica oleracea Bo6g049430 I 0.894
Bra040010 Brassica rapa Bra040010 I 0.894
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.894
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.893
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.893
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.892
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.892
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.891
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.891
TCM_035571 Theobroma cacao TCM_035571 I 0.891
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.890
Bra008285 Brassica rapa Bra008285 I 0.889
Ca_04385 Cicer arietinum Ca_04385 I 0.889
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.888
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.888
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.887
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.887
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.887
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.887
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.886
mgf021983m Mimulus guttatus mgf021983m I 0.885
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.882
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.882
Bo6g083690 Brassica oleracea Bo6g083690 I 0.881
Bo6g120870 Brassica oleracea Bo6g120870 I 0.881
Bra003703 Brassica rapa Bra003703 I 0.881
Bra015716 Brassica rapa Bra015716 I 0.881
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.881
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.881
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.881
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.881
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.881
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.881
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.881
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.881
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.881
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.880
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.880
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.879
Cla007910 Citrullus lanatus Cla007910 I 0.879
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.879
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.878
Pm022572 Prunus mume Pm022572 I 0.878
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.878
mgf018892m Mimulus guttatus mgf018892m N 0.877
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.876
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.874
MDP0000156139 Malus domestica MDP0000156139 I 0.874
Pm022570 Prunus mume Pm022570 I 0.872
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.872
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.872
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.871
F775_24861 Aegilops tauschii F775_24861 N 0.870
TCM_035565 Theobroma cacao TCM_035565 I 0.870
Ca_25135 Cicer arietinum Ca_25135 I 0.870
MDP0000451107 Malus domestica MDP0000451107 I 0.869
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.869
Ca_04386 Cicer arietinum Ca_04386 I 0.868
PK26613.1 Cannabis sativa PK26613.1 I 0.867
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.866
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.865
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.865
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.864
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.864
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.864
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.864
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.864
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.864
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.863
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.860
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.859
Bo8g027460 Brassica oleracea Bo8g027460 I 0.857
Bra036731 Brassica rapa Bra036731 I 0.857
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.857
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.857
PK24122.1 Cannabis sativa PK24122.1 I 0.857
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.855
TCM_001348 Theobroma cacao TCM_001348 I 0.853
30206.m000769 Ricinus communis 30206.m000769 I 0.853
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.851
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.851
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.850
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.850
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.849
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.848
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.846
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.846
Cla001992 Citrullus lanatus Cla001992 I 0.841
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.841
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.839
Bo2g091240 Brassica oleracea Bo2g091240 I 0.838
Pm001889 Prunus mume Pm001889 I 0.835
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.827
Bra003702 Brassica rapa Bra003702 I 0.824
mgf015314m Mimulus guttatus mgf015314m N 0.818