Pm001889 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm001889 T250410_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.812 0.475
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.812 0.475
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm001889 MADF 67 141
Pm001889 MADF 398 469

Links

Other MADF family TFs
Other Prunus mume TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.891
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.891
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.891
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.891
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.891
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.891
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.888
TCM_001348 Theobroma cacao TCM_001348 I 0.885
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.883
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.883
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.881
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.881
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.879
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.879
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.879
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.879
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.875
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.875
Cla007910 Citrullus lanatus Cla007910 I 0.873
30206.m000769 Ricinus communis 30206.m000769 I 0.873
Cla005046 Citrullus lanatus Cla005046 I 0.871
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.867
PK26613.1 Cannabis sativa PK26613.1 I 0.866
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.866
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.864
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.863
PRUPE_ppa003808mg Prunus persica PRUPE_ppa003808mg I 0.862
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.860
TCM_015563 Theobroma cacao TCM_015563 I 0.860
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.860
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.860
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.860
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.860
OB04G27270 Oryza brachyantha OB04G27270 I 0.860
OBART04G20290 Oryza barthii OBART04G20290 I 0.860
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.860
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.859
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.856
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.856
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.855
Pm024289 Prunus mume Pm024289 I 0.855
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.855
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.855
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.855
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.854
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.853
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.853
MDP0000451038 Malus domestica MDP0000451038 I 0.853
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.853
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.852
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.852
Si012121m.g Setaria italica Si012121m.g I 0.850
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.850
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.850
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.849
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.849
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.849
F775_26337 Aegilops tauschii F775_26337 I 0.848
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.848
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.848
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.848
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.848
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.848
30068.m002635 Ricinus communis 30068.m002635 I 0.847
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.846
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.846
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.845
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.845
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.845
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.844
MDP0000701272 Malus domestica MDP0000701272 I 0.844
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.841
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.841
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.841
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.841
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.841
Si034382m.g Setaria italica Si034382m.g I 0.840
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.839
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.838
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.838
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.838
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.837
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.837
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.836
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.836
OB02G33250 Oryza brachyantha OB02G33250 I 0.836
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.835
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.835
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.835
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.835
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.833
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.832
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.832
mgf004276m Mimulus guttatus mgf004276m I 0.832
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.832
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.830
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.830
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.830
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.830
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.830
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.830
OBART02G25970 Oryza barthii OBART02G25970 I 0.828
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.828
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.827
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.827
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.826
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.826
Pm022572 Prunus mume Pm022572 I 0.826
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.825
mgf015314m Mimulus guttatus mgf015314m N 0.825
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.824
MDP0000156139 Malus domestica MDP0000156139 I 0.823
MDP0000451107 Malus domestica MDP0000451107 I 0.822
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.821
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.820
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.820
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.819
mgf018892m Mimulus guttatus mgf018892m N 0.817
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.816
29576.m000223 Ricinus communis 29576.m000223 I 0.816
Ca_04386 Cicer arietinum Ca_04386 I 0.815
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.815
Bo6g049430 Brassica oleracea Bo6g049430 I 0.814
Bra040010 Brassica rapa Bra040010 I 0.814
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.813
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.812
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.812
mgf021983m Mimulus guttatus mgf021983m I 0.812
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.812