Pm022572 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm022572 T250420_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.856 0.681
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.856 0.681
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.824 0.717
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm022572 MADF 82 152
Pm022572 MADF 453 526

Links

Other MADF family TFs
Other Prunus mume TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.971
MDP0000156139 Malus domestica MDP0000156139 I 0.966
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.965
MDP0000451107 Malus domestica MDP0000451107 I 0.962
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.953
TCM_035565 Theobroma cacao TCM_035565 I 0.948
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.947
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.947
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.947
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.947
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.946
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.945
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.945
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.944
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.942
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.942
Bo6g083690 Brassica oleracea Bo6g083690 I 0.941
Bra003703 Brassica rapa Bra003703 I 0.941
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.941
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.941
Ca_25135 Cicer arietinum Ca_25135 I 0.941
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.941
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.941
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.941
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.941
PK24122.1 Cannabis sativa PK24122.1 I 0.941
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.940
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.940
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.939
Ca_04386 Cicer arietinum Ca_04386 I 0.939
30206.m000769 Ricinus communis 30206.m000769 I 0.938
TCM_001348 Theobroma cacao TCM_001348 I 0.937
Cla001992 Citrullus lanatus Cla001992 I 0.937
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.937
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.936
Bo6g120870 Brassica oleracea Bo6g120870 I 0.935
Bra015716 Brassica rapa Bra015716 I 0.935
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.935
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.935
Bra008285 Brassica rapa Bra008285 I 0.934
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.934
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.934
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.931
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.931
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.930
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.930
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.929
Ca_04385 Cicer arietinum Ca_04385 I 0.928
29576.m000223 Ricinus communis 29576.m000223 I 0.928
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.927
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.927
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.925
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.925
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.924
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.923
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.922
Pm022570 Prunus mume Pm022570 I 0.921
mgf021983m Mimulus guttatus mgf021983m I 0.921
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.921
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.921
TCM_035571 Theobroma cacao TCM_035571 I 0.918
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.918
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.918
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.917
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.917
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.917
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.916
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.916
mgf018892m Mimulus guttatus mgf018892m N 0.916
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.916
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.916
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.916
OB04G27270 Oryza brachyantha OB04G27270 I 0.913
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.913
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.909
Bo2g091240 Brassica oleracea Bo2g091240 I 0.909
OBART04G20290 Oryza barthii OBART04G20290 I 0.909
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.909
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.909
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.909
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.909
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.909
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.907
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.907
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.907
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.904
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.904
F775_26337 Aegilops tauschii F775_26337 I 0.903
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.903
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.903
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.902
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.902
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.901
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.900
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.900
Si012121m.g Setaria italica Si012121m.g I 0.900
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.900
MDP0000701272 Malus domestica MDP0000701272 I 0.900
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.900
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.899
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.899
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.899
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.899
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.899
Bo8g027460 Brassica oleracea Bo8g027460 I 0.897
Bra036731 Brassica rapa Bra036731 I 0.897
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.897
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.896
TCM_015563 Theobroma cacao TCM_015563 I 0.896
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.895
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.895
Cla005046 Citrullus lanatus Cla005046 I 0.895
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.894
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.894
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.892
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.892
Cla007910 Citrullus lanatus Cla007910 I 0.892
PK26613.1 Cannabis sativa PK26613.1 I 0.892
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.891
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.890
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.890
Pm024289 Prunus mume Pm024289 I 0.890
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.890
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.890
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.890
mgf004276m Mimulus guttatus mgf004276m I 0.889
30068.m002635 Ricinus communis 30068.m002635 I 0.886
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.886
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.885
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.885
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.885
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.884
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.884
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.884
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.884
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.884
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.884
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.884
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.884
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.883
Bra003702 Brassica rapa Bra003702 I 0.882
Si034382m.g Setaria italica Si034382m.g I 0.882
OBART02G25970 Oryza barthii OBART02G25970 I 0.881
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.881
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.881
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.880
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.878
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.878
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.878
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.875
OB02G33250 Oryza brachyantha OB02G33250 I 0.875
MDP0000451038 Malus domestica MDP0000451038 I 0.874
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.871
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.871
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.871
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.871
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.871
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.871
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.871
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.870
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.866
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.866
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.866
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.865
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.864
Bo6g049430 Brassica oleracea Bo6g049430 I 0.861
Bra040010 Brassica rapa Bra040010 I 0.861
F775_24861 Aegilops tauschii F775_24861 N 0.861
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.861
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.861
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.861
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.859
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.859
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.858
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.858
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.858
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.857
Si016578m.g Setaria italica Si016578m.g I 0.857
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.856
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.856
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.855
mgf015314m Mimulus guttatus mgf015314m N 0.853
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.850
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.850
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.834
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.832
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.826
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.826
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.826
Pm001889 Prunus mume Pm001889 I 0.826
AT1G76880 Arabidopsis thaliana AT1G76880 D 0.824
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.823
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.823
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.822
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.821
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.813