BRADI1G77610 (Brachypodium distachyon)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 BRADI1G77610 T248038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.860 0.599
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.860 0.599
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G77610.1 MADF 91 162
BRADI1G77610.1 MADF 430 515

Links

Other MADF family TFs
Other Brachypodium distachyon TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si034382m.g Setaria italica Si034382m.g I 0.945
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.945
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.942
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.942
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.942
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.942
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.938
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.938
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.935
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.932
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.927
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.927
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.927
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.925
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.925
Pm024289 Prunus mume Pm024289 I 0.925
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.922
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.921
OB04G27270 Oryza brachyantha OB04G27270 I 0.921
OBART04G20290 Oryza barthii OBART04G20290 I 0.921
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.921
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.921
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.921
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.921
Si012121m.g Setaria italica Si012121m.g I 0.921
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.917
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.916
F775_26337 Aegilops tauschii F775_26337 I 0.914
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.914
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.914
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.914
TCM_015563 Theobroma cacao TCM_015563 I 0.914
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.914
30068.m002635 Ricinus communis 30068.m002635 I 0.914
Cla005046 Citrullus lanatus Cla005046 I 0.913
MDP0000451038 Malus domestica MDP0000451038 I 0.913
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.912
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.912
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.912
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.910
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.910
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.910
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.909
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.908
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.907
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.906
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.905
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.904
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.903
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.903
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.903
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.902
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.902
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.902
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.902
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.902
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.901
MDP0000701272 Malus domestica MDP0000701272 I 0.901
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.900
OB02G33250 Oryza brachyantha OB02G33250 I 0.899
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.897
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.897
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.897
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.897
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.897
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.897
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.897
Si016578m.g Setaria italica Si016578m.g I 0.897
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.895
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.895
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.894
OBART02G25970 Oryza barthii OBART02G25970 I 0.894
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.894
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.892
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.892
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.892
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.892
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.889
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.888
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.885
mgf004276m Mimulus guttatus mgf004276m I 0.879
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.875
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.874
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.874
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.872
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.868
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.866
F775_24861 Aegilops tauschii F775_24861 N 0.864
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.864
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.863
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.863
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.860
Bo6g049430 Brassica oleracea Bo6g049430 I 0.860
Bra040010 Brassica rapa Bra040010 I 0.860
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.860
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.860
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.857
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.857
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.857
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.853
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.853
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.849
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.849
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.847
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.845
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.845
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.843
Pm022570 Prunus mume Pm022570 I 0.842
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.842
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.841
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.837
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.834
Pm022572 Prunus mume Pm022572 I 0.834
29576.m000223 Ricinus communis 29576.m000223 I 0.832
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.832
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.832
TCM_035571 Theobroma cacao TCM_035571 I 0.831
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.831
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.829
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.829
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.829
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.829
MDP0000156139 Malus domestica MDP0000156139 I 0.828
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.827
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.827
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.827
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.826
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.822
MDP0000451107 Malus domestica MDP0000451107 I 0.822
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.820
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.819
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.818
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.818
Bra008285 Brassica rapa Bra008285 I 0.817
mgf018892m Mimulus guttatus mgf018892m N 0.817
mgf021983m Mimulus guttatus mgf021983m I 0.817
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.816
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.816
TCM_035565 Theobroma cacao TCM_035565 I 0.816
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.815
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.815
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.815
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.815
Ca_04385 Cicer arietinum Ca_04385 I 0.814
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.813
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.813
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.813