LPERR02G21190 (Leersia perrieri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 LPERR02G21190 T249354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.893 0.696
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.893 0.696
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR02G21190.1 MADF 150 219
LPERR02G21190.1 MADF 445 517

Links

Other MADF family TFs
Other Leersia perrieri TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB02G33250 Oryza brachyantha OB02G33250 I 0.950
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.948
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.948
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.948
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.948
OBART02G25970 Oryza barthii OBART02G25970 I 0.944
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.944
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.942
OB04G27270 Oryza brachyantha OB04G27270 I 0.930
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.930
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.927
OBART04G20290 Oryza barthii OBART04G20290 I 0.927
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.927
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.927
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.927
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.924
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.924
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.923
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.923
Si012121m.g Setaria italica Si012121m.g I 0.923
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.923
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.922
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.922
Cla005046 Citrullus lanatus Cla005046 I 0.920
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.919
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.919
Si034382m.g Setaria italica Si034382m.g I 0.919
Pm024289 Prunus mume Pm024289 I 0.919
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.919
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.918
MDP0000701272 Malus domestica MDP0000701272 I 0.917
F775_26337 Aegilops tauschii F775_26337 I 0.916
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.916
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.916
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.916
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.916
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.916
TCM_015563 Theobroma cacao TCM_015563 I 0.915
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.914
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.914
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.914
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.914
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.914
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.914
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.914
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.914
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.913
MDP0000451038 Malus domestica MDP0000451038 I 0.913
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.911
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.910
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.909
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.909
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.909
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.909
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.909
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.909
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.909
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.909
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.909
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.908
30068.m002635 Ricinus communis 30068.m002635 I 0.906
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.906
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.905
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.905
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.905
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.904
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.904
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.902
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.902
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.902
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.901
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.900
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.900
Bo6g049430 Brassica oleracea Bo6g049430 I 0.897
Bra040010 Brassica rapa Bra040010 I 0.897
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.897
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.895
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.895
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.894
mgf004276m Mimulus guttatus mgf004276m I 0.894
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.893
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.893
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.893
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.890
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.889
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.888
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.888
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.888
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.884
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.881
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.880
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.880
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.880
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.879
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.879
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.876
Pm022570 Prunus mume Pm022570 I 0.876
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.875
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.873
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.873
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.873
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.872
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.870
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.869
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.869
MDP0000156139 Malus domestica MDP0000156139 I 0.867
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.866
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.866
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.864
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.864
Pm022572 Prunus mume Pm022572 I 0.864
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.863
Si016578m.g Setaria italica Si016578m.g I 0.863
TCM_035565 Theobroma cacao TCM_035565 I 0.863
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.863
MDP0000451107 Malus domestica MDP0000451107 I 0.863
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.862
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.861
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.861
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.858
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.857
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.857
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.855
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.854
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.853
29576.m000223 Ricinus communis 29576.m000223 I 0.852
30206.m000769 Ricinus communis 30206.m000769 I 0.851
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.851
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.850
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.850
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.850
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.849
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.849
Bo2g091240 Brassica oleracea Bo2g091240 I 0.848
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.848
mgf021983m Mimulus guttatus mgf021983m I 0.848
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.847
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.846
Bo8g027460 Brassica oleracea Bo8g027460 I 0.844
Bra036731 Brassica rapa Bra036731 I 0.844
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.844
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.843
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.842
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.839
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.839
Ca_25135 Cicer arietinum Ca_25135 I 0.838
Cla007910 Citrullus lanatus Cla007910 I 0.837
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.836
TCM_035571 Theobroma cacao TCM_035571 I 0.836
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.836
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.836
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.836
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.835
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.835
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.835
TCM_001348 Theobroma cacao TCM_001348 I 0.835
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.834
mgf018892m Mimulus guttatus mgf018892m N 0.834
Ca_04386 Cicer arietinum Ca_04386 I 0.832
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.830
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.828
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.828
Bo6g083690 Brassica oleracea Bo6g083690 I 0.826
Bo6g120870 Brassica oleracea Bo6g120870 I 0.826
Bra003703 Brassica rapa Bra003703 I 0.826
Bra015716 Brassica rapa Bra015716 I 0.826
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.826
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.826
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.826
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.826
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.826
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.826
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.826
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.824
Cla001992 Citrullus lanatus Cla001992 I 0.824
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.824
PK26613.1 Cannabis sativa PK26613.1 I 0.820
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.819
PK24122.1 Cannabis sativa PK24122.1 I 0.819
Bra003702 Brassica rapa Bra003702 I 0.818
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.818
Ca_04385 Cicer arietinum Ca_04385 I 0.813
Bra008285 Brassica rapa Bra008285 I 0.812